PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn037111
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 358aa    MW: 39396.8 Da    PI: 5.2084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn037111genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.9e-20107157155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a+++a+k+++g
  Achn037111 107 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALEAARAYDEAAKAMYG 157
                 56*****999.**********8...3.35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-14107157IPR001471AP2/ERF domain
CDDcd000184.30E-33107166No hitNo description
PROSITE profilePS5103222.366108165IPR001471AP2/ERF domain
SMARTSM003802.9E-36108171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-31108165IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-21108165IPR016177DNA-binding domain
PRINTSPR003675.3E-10109120IPR001471AP2/ERF domain
PRINTSPR003675.3E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MAQTKRTHSP ATTQQQTIES PLARKWSDTG PIGPHFDTFA FALPRKRKSR NRRDGPNGIV  60
EKLAKWKEYN EKLESLDNSP KPVRRAPAKG SKKGCMKGKG GPQNSNCNYR GVRQRTWGKW  120
VAEIREPNRG SRLWLGTFPT ALEAARAYDE AAKAMYGPSA RLNFANGSSF IESSVESASL  180
PTTSGSGSST SSSYSEVKLH APKAKHEDGD DESRIGGNSP LASNNMPMTA VKEEVNDEPV  240
EFNGKGEQME LIGKPSLDYI LEDFSLDETF DVEELLGILD EMGQSSDRIN FQGEKPSDLS  300
YQLQNPDAKL LGSLNHMEQA PPVVDYGLDF LKPGREEDFN FALDDLGFLQ MDSDLGL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1697164371Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14653RKSRNRRD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ8698540.0GQ869854.1 Actinidia deliciosa ethylene response factor 3 (ERF3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028118168.11e-106dehydration-responsive element-binding protein 2C-like
TrEMBLA0A2R6RWQ60.0A0A2R6RWQ6_ACTCH; Dehydration-responsive element-binding protein like
STRINGXP_009594350.14e-86(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-48ERF family protein