PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn032371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 325aa MW: 37133.2 Da PI: 8.9306 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.9 | 1.7e-31 | 62 | 115 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR Achn032371 62 PRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNMKGLNISHVKSHLQMYRR 115 8****************************************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.701 | 58 | 118 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.7E-29 | 58 | 115 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.81E-14 | 60 | 114 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.9E-22 | 62 | 116 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.1E-8 | 63 | 114 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MEGNDSSECS KTSPRLDQNE EEEEEETNNT GKARDSASSS NSTVEESERK SSVRPYVRSK 60 MPRLRWTPDL HLRFVHAVER LGGQERATPK LVLQLMNMKG LNISHVKSHL QMYRREKIDD 120 PSQALADHRH LVEVGDRNVY NLSQLPMLQG FNRRHHSSFR FGNTSWSGHE NWVHSPFISR 180 SRIDTERSGF YGTFHERVFG NRYSNLANEQ STWRNNEPKE AFGSIHDPLI NAQLQVKELG 240 NLSNHIPHDL NKRMNIEERI AVKRKASNWD LDLNLSLGVK QKIEEDNSNL SLSLYLGSSK 300 ISGSKEGDSE KNGRRKASTL DLTI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 3e-16 | 63 | 117 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-16 | 63 | 117 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-16 | 63 | 117 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-16 | 63 | 117 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028056375.1 | 1e-132 | myb-related protein 1-like | ||||
Refseq | XP_028056445.1 | 1e-132 | myb-related protein 1-like | ||||
TrEMBL | A0A2R6R8I7 | 0.0 | A0A2R6R8I7_ACTCH; Myb family transcription factor | ||||
STRING | EOY07117 | 1e-105 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4382 | 21 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 1e-57 | G2-like family protein |