PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn027091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 127aa MW: 14074.9 Da PI: 10.4349 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 82 | 126 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+ Achn027091 82 IYHGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAA 126 69****998.**********843...6*******************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 9.4E-12 | 81 | 126 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.79E-24 | 81 | 126 | No hit | No description |
SMART | SM00380 | 2.8E-18 | 82 | 126 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.77 | 82 | 126 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-24 | 82 | 126 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-17 | 82 | 126 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 5.1E-10 | 83 | 94 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.1E-10 | 105 | 121 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MEEQINIESL AQDYLPSSPT TTTTSSSTTT TTTTTSSSFS STSDSLKSCK AQKSLKRVLQ 60 EAKNGKESRK KHKIGVDCKH PIYHGVRMRN WGKWVSEIRE PRKKSRIWLG TYPTAEMAAR 120 AHDVAA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028051115.1 | 3e-51 | ethylene-responsive transcription factor ERF034 | ||||
TrEMBL | A0A2R6RCU9 | 6e-57 | A0A2R6RCU9_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | EMJ19998 | 4e-31 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-30 | ERF family protein |