PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn014781 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 149aa MW: 16421 Da PI: 8.4671 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 51.4 | 2.5e-16 | 4 | 32 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Achn014781 4 ATPKSVLELMNVKDLTLAHVKSHLQMYRT 32 9***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.2E-6 | 3 | 33 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-11 | 4 | 32 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 1.6E-14 | 4 | 33 | IPR009057 | Homeodomain-like |
PRINTS | PR00463 | 1.3E-5 | 70 | 87 | IPR002401 | Cytochrome P450, E-class, group I |
SuperFamily | SSF48264 | 1.31E-15 | 77 | 147 | IPR001128 | Cytochrome P450 |
Gene3D | G3DSA:1.10.630.10 | 1.7E-16 | 78 | 147 | IPR001128 | Cytochrome P450 |
Pfam | PF00067 | 4.2E-12 | 78 | 146 | IPR001128 | Cytochrome P450 |
PRINTS | PR00385 | 1.3E-7 | 81 | 98 | IPR001128 | Cytochrome P450 |
PRINTS | PR00463 | 1.3E-5 | 90 | 116 | IPR002401 | Cytochrome P450, E-class, group I |
PRINTS | PR00463 | 1.3E-5 | 133 | 148 | IPR002401 | Cytochrome P450, E-class, group I |
PRINTS | PR00385 | 1.3E-7 | 134 | 145 | IPR001128 | Cytochrome P450 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005506 | Molecular Function | iron ion binding | ||||
GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | ||||
GO:0020037 | Molecular Function | heme binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MTGATPKSVL ELMNVKDLTL AHVKSHLQMY RTVKSTDKAT GNECSSQDDI RVVVFHLRWI 60 REGDIPVLEV YAVSRRAVIL GGSDTTTGML TWAISLLLNN QAALKKAQEG LDLHEGVDGK 120 LMIQTSKNRV YLEAIIKETL RLYPADPS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP283472 | 2e-39 | KP283472.1 Prunus armeniaca aberrant testa shape (ATS) gene, complete cds. | |||
GenBank | KP283473 | 2e-39 | KP283473.1 Prunus incisa isolate 462-2010A aberrant testa shape (ATS) gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018846687.1 | 6e-23 | PREDICTED: cytochrome P450 82C4-like | ||||
TrEMBL | A0A2I4GS12 | 1e-21 | A0A2I4GS12_JUGRE; cytochrome P450 82C4-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2468 | 23 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 1e-17 | G2-like family protein |