PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn013371
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 356aa    MW: 39840.2 Da    PI: 8.9945
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn013371genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.72e-3166119255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+
  Achn013371  66 PRLRWTPDLHLCFVRAIEKLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 119
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.0E-2962120IPR009057Homeodomain-like
PROSITE profilePS5129412.46662122IPR017930Myb domain
SuperFamilySSF466899.5E-1563120IPR009057Homeodomain-like
TIGRFAMsTIGR015576.8E-2366121IPR006447Myb domain, plants
PfamPF002496.3E-967118IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MKGSDSAEEY SNPSPSNKSK DDDERDEIDD NSKPKNGSSS SNSTVEESEK KTVSGSVRQY  60
VRSKTPRLRW TPDLHLCFVR AIEKLGGQER ATPKLVLQLM NIKGLSIAHV KSHLQMYRSK  120
KIDDPAQEQG IVFDGGDHHI YNLSQLPMMQ SFNQMPTSSL RYGDASRSTS YPNQIYNPCV  180
GKLSSNGTRQ PYSSTSAMIF KSIDGISPSY DFHTHSSFNR QATRKRTEGQ EQFQLFESHG  240
SWKTQIRPSS MESINLMNQP QSAKRSSLSF RVASDEQIGV KRNVPDSDCT LDLNLSLKMS  300
PKHDEFDDKG LRGEEVDSSL SLSLFSSPSS KHRRLEESEG TRKNARSGRT LDLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-1767121357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-1767121357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-1767121357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-1767121357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-1767121458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028084429.11e-133myb family transcription factor PHL8 isoform X2
TrEMBLA0A2R6PLM10.0A0A2R6PLM1_ACTCH; Myb family transcription factor
STRINGVIT_13s0067g01500.t011e-101(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA85732129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.17e-49G2-like family protein