PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn009471 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 381aa MW: 42716.2 Da PI: 4.6256 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.3 | 3e-23 | 6 | 127 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p+Gf F+Ptd+e++++yL kk g++l+l+ vi+e d+y+ e L + ++++e+++yfF++ +kky +g+++ r++ +++W++ d + +++++ Achn009471 6 PVGFLFRPTDKEVIQHYLLKKQIGEELPLNGVIQERDVYSEE--VLSEVFQSSETHVYFFTQLKKKYLNGSNHDRTVGKATWRSESVDD-IRLDENTVI 101 89***************************99********987..67777889999****************************998765.55559999* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g k++L + + + e+ dW m+ey+l Achn009471 102 GKKRVLDYI--NPGSVEHRDWSMKEYSL 127 *********..55556699*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.55E-24 | 3 | 148 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.942 | 5 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-13 | 6 | 127 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MAITFPVGFL FRPTDKEVIQ HYLLKKQIGE ELPLNGVIQE RDVYSEEVLS EVFQSSETHV 60 YFFTQLKKKY LNGSNHDRTV GKATWRSESV DDIRLDENTV IGKKRVLDYI NPGSVEHRDW 120 SMKEYSLDGV LLELPQTSSD YVVCLLEKKE RAIKRDRQKN MQSKRNAPVN TPSGCFNNKR 180 IKLSSKQNKQ IENRQTDSAP LVDEQVGLIN GEAGVETLEQ ITQYLLEPDS SMVDADEENV 240 ERVMQYLLEP DSPLDSMPPL MEAKPAPTVN EDGGYPSGEN EVRMQPSIHD QSLPSSNREY 300 AVLDYINSLA SAPEVTAIEN DVGILEQPSI NKKRRLVLVA SIQGEAVEPM VNENVAVASL 360 PPPALAAFPE GLRQTRFALV * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-15 | 3 | 150 | 13 | 169 | Stress-induced transcription factor NAC1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6QPD5 | 1e-143 | A0A2R6QPD5_ACTCH; NAC domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-16 | NAC domain containing protein 32 |