PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn009241
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 506aa    MW: 55744.1 Da    PI: 8.0678
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn009241genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18105154255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +gr++AeIrdp     +  r++lg+f+tae Aa a++aa+++++g
  Achn009241 105 HYRGVRKRP-WGRYAAEIRDPI----KkSRVWLGTFDTAEAAAMAYDAAAREFRG 154
                 6********.**********72....35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.03E-18104162No hitNo description
PROSITE profilePS5103223.96105162IPR001471AP2/ERF domain
SMARTSM003801.6E-38105168IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-22105163IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.7E-31105162IPR001471AP2/ERF domain
PfamPF008473.8E-12105154IPR001471AP2/ERF domain
PRINTSPR003673.4E-10106117IPR001471AP2/ERF domain
PRINTSPR003673.4E-10128144IPR001471AP2/ERF domain
Gene3DG3DSA:2.70.150.105.7E-6304353IPR008250P-type ATPase, A domain
SuperFamilySSF816532.09E-5306352No hitNo description
Gene3DG3DSA:3.40.1110.101.3E-9410443IPR023299P-type ATPase, cytoplasmic domain N
PROSITE patternPS001540421427IPR018303P-type ATPase, phosphorylation site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0000166Molecular Functionnucleotide binding
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MIHHVNGSVE KTRLAETQGR VSDSECYAPN GRVENKYCLA STRKCRETDD LGRLGFKAPR  60
VPQPNSLFGF PLHNIENNYN SDIIMAPKGK IDGGNAKANG VKEAHYRGVR KRPWGRYAAE  120
IRDPIKKSRV WLGTFDTAEA AAMAYDAAAR EFRGSKAKTN FPFPVETTHH SPSQSSTVES  180
SSRDGPSHAP PELDLTRRFG AAAASGYPFF HCQVGVAAVP QALPLFLHHR VAPELDGGLG  240
GGELSESDSS SVVECGPCEA PNETGVHLYG SGRKRDGLTR DFFTVTRRIQ RPALNWSRSE  300
REREAVTTEK KQRKIQAQDT RVGNIVWLSE NDEVPCDLVL IGNSDPQGLC YVEIINAAAF  360
EMSFKYFTAM CQVSLDLVKS LYAKFIDWDN EMVDLETGTP AHAAKTAISE DLGQVEYILT  420
DKTGTLTENR MIFKRCCISS IFYGNESGSR FARLAMMWSS LMPSPVAQDK EAIVRAAARL  480
HMVFVNKNAN TLGTVILVLT VYGHK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-21101167168ATERF1
3gcc_A2e-21101167168ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-27erf domain protein 9