PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn001931 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 240aa MW: 26948.1 Da PI: 6.1733 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 20.3 | 1.2e-06 | 18 | 42 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+rl+W+ eLH+ F +av+qL G++ Achn001931 18 KERLKWNDELHDLFEKAVNQLWGPD 42 68*******************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.4E-5 | 17 | 43 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 1.8E-6 | 161 | 183 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MPSRASRSFD SDTGFSGKER LKWNDELHDL FEKAVNQLWG PDSKFKNHNY GIIWFCLYLI 60 MDANVISHGQ GTAQAANKDI IGTQVTEHNT AQAEVTGKHW RKNNKVTVEV PSASEASKLE 120 VDDDCDDPHA LIAFQFSSYM EEEYSSVCKN KVEKYLGGTT VKVQRRLKLK IEAQGKYLER 180 IQEDLNNIIN NTAKQGKAFS PISLLSLCEK SESNTRESES DLEIDKAKAM SKEESHAPK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6R8D9 | 6e-53 | A0A2R6R8D9_ACTCH; Myb family transcription factor |