PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA74G00015 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | WRKY | ||||||||
Protein Properties | Length: 206aa MW: 23662.5 Da PI: 6.7184 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.7 | 5.4e-24 | 88 | 149 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg+ WrKYGqK++kgs + r+Y+rC++a +C++kk+v++ +e+p v ++Y+geH ++ AA74G00015 88 LDDGFVWRKYGQKTIKGSLHQRNYFRCAYAkdqNCKAKKQVQQIQENPPVYRTIYNGEHLCQ 149 59***************************98999*************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-25 | 80 | 151 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.126 | 83 | 151 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-24 | 86 | 151 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.8E-35 | 88 | 150 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.1E-24 | 89 | 149 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MEKEAMAAIL RGQGSLNTLK MLTSRSDPTV DTHLDNILHS YSQILSFLFR SHKSKSTDKQ 60 SLNRKSSGDE GEEEESVYRV VDSPNLILDD GFVWRKYGQK TIKGSLHQRN YFRCAYAKDQ 120 NCKAKKQVQQ IQENPPVYRT IYNGEHLCQT PIFMYSTDND THNSTKVFQF DNPDQAITHS 180 KLPLVVPVDP VETVDHTRDD DLMISY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-17 | 88 | 149 | 8 | 69 | OsWRKY45 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA74G00015 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5609 | 18 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.1 | 2e-40 | WRKY DNA-binding protein 67 |