PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA59G00006
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family GeBP
Protein Properties Length: 328aa    MW: 38834.3 Da    PI: 5.4445
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA59G00006genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57365.31.4e-201011831798
      DUF573  17 qGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh.dqkifelskkiWgs 98 
                 +G++df++  + s+++d daf  ++k+ +++k+sk+ql+ Kir+LK +f+++ +k ++g++ +fs+++ d ++f+ls+ +Wg+
  AA59G00006 101 KGILDFQNVGDLSYKADSDAFLLYIKDFMNVKFSKEQLMRKIRKLKTRFENNIEKFDNGEDLKFSTTSdDYEVFKLSNLLWGQ 183
                 7**************************************************************987661679*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.4E-15101182IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MLVMNRVFSE EDSELHTGEN RLNLTRKSVI EVDEVSGTSA MLRRRKQPKI TLFSSSNSKM  60
NWTKDDELII LKVFYFFTIF YFREFCESLF VESLLPFEPC KGILDFQNVG DLSYKADSDA  120
FLLYIKDFMN VKFSKEQLMR KIRKLKTRFE NNIEKFDNGE DLKFSTTSDD YEVFKLSNLL  180
WGQNKDQFAS PVHINQPNQE KKEKKEKKKK EKMNEKEKEN EAFVEHVLVN YTIDMEKEKE  240
IDMDMEKNGG KEDSEEEWCD LEDAFEATLF KNLSKYQQKL MLQSLRNIGA DKRKELRNEW  300
KALLVEEVEL NIKKQAFSAK LVNAHLCN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA59G00006
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM124401528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00270.14e-33DNA-binding storekeeper protein-related transcriptional regulator