PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA57G00127
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 273aa    MW: 31251.1 Da    PI: 4.5504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA57G00127genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39e-19104154255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+++AeIrd + ng  +r++lg+f taeeAa a+++a+ +++g
  AA57G00127 104 KFRGVRRRP-WGKFAAEIRDSTRNG--ARVWLGTFETAEEAAMAYDKAAVRIRG 154
                 89*******.**********44465..************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-28103163IPR001471AP2/ERF domain
PfamPF008471.3E-12104154IPR001471AP2/ERF domain
PROSITE profilePS5103222.392104163IPR001471AP2/ERF domain
CDDcd000184.76E-29104162No hitNo description
SMARTSM003805.1E-35104169IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-20104164IPR016177DNA-binding domain
PRINTSPR003671.1E-10105116IPR001471AP2/ERF domain
PRINTSPR003671.1E-10128144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MAFSDLQEPD KEILENVWAN FIKKPETCKE PFHVSQISTS WEALPILDES IEDFISFPNL  60
EMSKEVQEWE ENFDSIASIP SKTGYSRLTN PTGLSSLSSC KTRKFRGVRR RPWGKFAAEI  120
RDSTRNGARV WLGTFETAEE AAMAYDKAAV RIRGTQKAHT NFHLQTVLKA MELDFGSNYY  180
PINRLNTSKP MRNYGEIGGK ERIRVYDEII ENPKEVVCET SYCGLLGSEE RNEDFMLEEG  240
KMVNGEETFC DMFGLFEFQD LGSDYLDALL SSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-25101165265ATERF1
3gcc_A3e-25101165265ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA57G00127
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002867990.11e-116ethylene-responsive transcription factor ERF091
SwissprotO495151e-113ERF91_ARATH; Ethylene-responsive transcription factor ERF091
TrEMBLD7MCS01e-114D7MCS0_ARALL; Uncharacterized protein
STRINGBostr.30275s0319.1.p1e-116(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-105ERF family protein