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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AA57G00005 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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| Family |
GRAS |
| Protein Properties |
Length: 540aa MW: 59809.6 Da PI: 6.0032 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AA57G00005 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 398.1 | 9e-122 | 155 | 525 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
l+e+L+e A+avs+gd++ a +++ l++++s +g+p+qRl ay++e+L+arl +s+s++ykal+++e + e ++++ +++e++P+ kf++ aN
AA57G00005 155 LKEVLVEGARAVSDGDFATAYGFIEVLEQMVSVSGSPIQRLGAYMLEGLRARLEGSGSNIYKALKCNEPT---GRELMSYMGVLYEICPYWKFAYTSAN 250
5789*****************************************************************9...99999999****************** PP
GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
aIlea++ge r+HiiDf+i qG Q++ L+q+La+Rp+ p lR+Tgv++++s+ + l+ +ge+L+k+A+++gvpfef+ + + +++ e+L v
AA57G00005 251 AAILEAMAGELRIHIIDFQIAQGSQYMFLIQELAKRPGRRPFLRVTGVDDSQSNhaRGGGLKLVGEKLSKVAQSCGVPFEFHD-AIMSGCKVQREHLGV 348
**************************************************9988889999***********************.7888999******** PP
GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
+ g a+aVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++Fl rf+e+l+yy+a+f+s++a p ++++ri+ E+++++r+iv
AA57G00005 349 EAGFAVAVNFPYVLHHMPDESVSVENHRDRLLHLVKSLSPKVVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPGDDKQRISAEQHCVARDIV 447
*************************************************************************************************** PP
GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
n++ace+ er+erhe l+kWr r+++aGF p+++ aa ++ +l+ ++++ y++ ++g+l+l Wk+rp+ ++SaWr
AA57G00005 448 NMIACEEWERVERHEVLGKWRVRMMMAGFIGWPVTTAAAFAVSEMLKGYDKN-YKLGGSEGALYLFWKRRPMATCSAWR 525
**************************************************66.*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MQTSQKHHSD AGFHMLYPQA YCSSQFQVID NNAFSDLPSK EQFFTLESST ASGSLPTSDS 60
PSVSITSGRS PFSPQGSQSC ISDLHHSPDN VYGSPLSGLS SCAYDEAGFK NKIRELEISL 120
LSGDSKVPEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EGARAVSDGD FATAYGFIEV 180
LEQMVSVSGS PIQRLGAYML EGLRARLEGS GSNIYKALKC NEPTGRELMS YMGVLYEICP 240
YWKFAYTSAN AAILEAMAGE LRIHIIDFQI AQGSQYMFLI QELAKRPGRR PFLRVTGVDD 300
SQSNHARGGG LKLVGEKLSK VAQSCGVPFE FHDAIMSGCK VQREHLGVEA GFAVAVNFPY 360
VLHHMPDESV SVENHRDRLL HLVKSLSPKV VTLVEQESNT NTSPFLSRFV ETLDYYTAMF 420
ESIDAARPGD DKQRISAEQH CVARDIVNMI ACEEWERVER HEVLGKWRVR MMMAGFIGWP 480
VTTAAAFAVS EMLKGYDKNY KLGGSEGALY LFWKRRPMAT CSAWRPNLNP SQSQNLNFTE
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
