PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA53G01080 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | ZF-HD | ||||||||
Protein Properties | Length: 97aa MW: 10463.5 Da PI: 7.7972 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 103.8 | 1.1e-32 | 26 | 83 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +vrY eC+kNhAa++Gg+avDGC+Efm+s++eegt a+l+CaAC CHR+FHRr v++e AA53G01080 26 SVRYGECQKNHAAAVGGYAVDGCREFMASSTEEGTLASLTCAACTCHRSFHRRIVDSE 83 68***************************9999********************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 7.0E-29 | 1 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 2.5E-28 | 27 | 79 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 6.3E-28 | 28 | 78 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.519 | 29 | 79 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MRKRQVVLRR AAEEPSRNSS TASALSVRYG ECQKNHAAAV GGYAVDGCRE FMASSTEEGT 60 LASLTCAACT CHRSFHRRIV DSEASCEYDN SPSSNGN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA53G01080 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015583772.1 | 1e-41 | mini zinc finger protein 2 | ||||
Refseq | XP_018481496.1 | 9e-42 | PREDICTED: mini zinc finger protein 2-like | ||||
Refseq | XP_018481497.1 | 9e-42 | PREDICTED: mini zinc finger protein 2-like | ||||
Swissprot | Q9LJW5 | 1e-38 | MIF2_ARATH; Mini zinc finger protein 2 | ||||
TrEMBL | B9T6Z4 | 2e-40 | B9T6Z4_RICCO; Transcription factor, putative | ||||
STRING | XP_002534013.1 | 4e-41 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM944 | 28 | 114 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 6e-41 | mini zinc finger 2 |
Publications ? help Back to Top | |||
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