PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA33G00033
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family Nin-like
Protein Properties Length: 958aa    MW: 106806 Da    PI: 5.2232
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA33G00033genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.32.3e-26634696252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLg............vclTvLKriCRqyGIkRWPhRkiksl 52 
                 ek+i le+l++yF++++kdAAk++g            vc+T+LKriCRq+GI RWP+Rkik++
  AA33G00033 634 EKTIGLEVLRQYFAGSLKDAAKSIGdsdvirfhsdvaVCPTTLKRICRQHGITRWPSRKIKKV 696
                 799**********************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151915.426623716IPR003035RWP-RK domain
PfamPF020422.3E-22637696IPR003035RWP-RK domain
SuperFamilySSF542775.05E-24849944No hitNo description
Gene3DG3DSA:3.10.20.2401.1E-24857941No hitNo description
PROSITE profilePS5174528.957859942IPR000270PB1 domain
SMARTSM006661.2E-27859942IPR000270PB1 domain
PfamPF005641.8E-19860941IPR000270PB1 domain
CDDcd064072.06E-43860941No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 958 aa     Download sequence    Send to blast
MEDNGGGEGN GGLSPNSTFG GFPETAMDLD FMEELLFDGC WLETTDGKSL NQTEESASAS  60
IAMNDNNSFL YSYQELITSH FGENSSQNNE ERERLMLPSS PNYLKIESMN QESLNQEVTS  120
SAETERFLLE ESEVGRRWWI APRTSTGPSS SVTERLLQAI NGLNEAIQDK DFLVQIWVPF  180
HQEGKNFLTT LAQPHLFNQN YSSLAKYRHV SETYNFPTDE DSKESQGLPG RVFLRKLPEW  240
TPDVRFFGSD EYPRIKEARN CDVRGSLALP VFERGSGTCL GVVEIVTTTQ KMNYRPELEN  300
ICKALEAVDL RSSNHPSIEV YSEFYQAALP EISDFLLSVC RTYDLPLALS WAPCARQGKS  360
GSRHSNENIS QCVSTIDFAC IAFEEQSNSF LEACSEHHLL QEEGIVGKAF KATKLYFVPD  420
VTTFNRKNYP LAHHAKISGL HAALAVPLKS KFNGLVEFVL EFFFPKACLE TEAQQELLKS  480
LYGTLQQDFR SLNLVIDKDL ELEIVLPVRE TMVIQENPLN GTETTENLKS RSLTEIHQQE  540
SSWIPHMLNA NEKGKGMSLS WEYQKEDPTE EFKLTSGWDN SQLDPRSNNF ISEPEQFQKG  600
PIIEVDPSID SASTAAGKVL GSRKAGEKRR TKTEKTIGLE VLRQYFAGSL KDAAKSIGDS  660
DVIRFHSDVA VCPTTLKRIC RQHGITRWPS RKIKKVGHSL KKLQLVMDSV QGAQGSIQLD  720
SFYTSFPELS SPNMSGNGPD LQTRHLNAQT ENGVPAQETT APKSPSSSCS KSSGSSASCS  780
NGADKSTNTL NTANTLVSED AGAVVKKGQH KAELVTMDQE ETKCLSRSQS HKIFKEHPLL  840
ENLPPLPGSS NKGLRAGGSI KVKATFGEAR VRFTLLPSCG FRELQQEIAR RFNIEEISRF  900
DLKYLDDDKE WVLLTCDADL EECIDIYRSS QSQTIKISLH EGFQVKLGGS FGSSRRSL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA33G00033
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010548150.10.0PREDICTED: protein NLP2-like
RefseqXP_010548151.10.0PREDICTED: protein NLP2-like
RefseqXP_010548152.10.0PREDICTED: protein NLP2-like
RefseqXP_019058754.10.0PREDICTED: protein NLP2-like
SwissprotQ7X9B90.0NLP2_ARATH; Protein NLP2
TrEMBLV4MB360.0V4MB36_EUTSA; Uncharacterized protein
STRINGBostr.18351s0175.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19982777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.10.0Nin-like family protein