PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA32G00340
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family HB-other
Protein Properties Length: 468aa    MW: 52272.7 Da    PI: 8.3964
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA32G00340genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox491e-152451457
                HHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox 14 eLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                +Le+++++++yp++e++++LA+++gLte+qV+ WF+ rR k+k+
  AA32G00340  2 ALENFYNEHKYPTEEMKAKLAEEIGLTEKQVSGWFCHRRLKDKR 45
                79****************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.386146IPR001356Homeobox domain
SMARTSM003894.8E-8150IPR001356Homeobox domain
SuperFamilySSF466891.54E-13255IPR009057Homeodomain-like
PfamPF000463.5E-13245IPR001356Homeobox domain
CDDcd000868.78E-14246No hitNo description
Gene3DG3DSA:1.10.10.603.1E-16245IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MALENFYNEH KYPTEEMKAK LAEEIGLTEK QVSGWFCHRR LKDKRSVKED GNAIGSQDRS  60
SVVLHDRGSG HRQDSCGSTK QTDYWNPKPR EVESQRLYGG SYVGDVDGED STSSERSSSL  120
HKNLVSTKDG VCDVEKNSRY VARSNVIKHP QVTRSYGSNK PSGYLKVKGE TENVAITAVK  180
RQLGRQYRED GPPLGVDFDP LPPAAFEPQT NAIGQEPIYV GNQRRSHSPY VAGTRKSINP  240
GHSHEAYKSK IHSPDPYSED EDEDDEDNVM VGIEPGLRDK QSLGELRLKS PSLTFSNPVL  300
DRNSLKESFK SLPREIPLIN SKKSRISSKH RAEGFRHNPI PNFQDLSGSN LESNETPLHS  360
EYYTKSSKLV PLGSSQSPNT MERTPSSGMA GKYHGERSHM KMQREKLHST NEPLVTKQVK  420
HSYLQQGYAP RASYSELQGR KGQINRSGFE VPSSLSGDET AESSSSMD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA32G00340
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002874873.20.0uncharacterized protein LOC9310940
TrEMBLA0A1J3D4B50.0A0A1J3D4B5_NOCCA; Homeobox protein BarH-like 1
STRINGBostr.2983s0116.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM122022531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.10.0HB-other family protein