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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | AA31G00726 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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| Family | STAT | ||||||||
| Protein Properties | Length: 2301aa MW: 255585 Da PI: 6.9754 | ||||||||
| Description | STAT family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | STAT | 165.1 | 1.3e-51 | 1318 | 1432 | 1 | 114 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcd.nrLfrikfeipklkkyp 96
ldvvl+na+gq+v+k+ evvasLlyad+g+ vek++++e+pLLis +G+e s+ drp+kll+Gr+sf l+isq+ sk++ +rLf++kfeip+ k yp
AA31G00726 1318 LDVVLSNAIGQTVHKEAEVVASLLYADTGTRVEKTSESESPLLISHQGIESSADDRPIKLLNGRSSFNLRISQVISKSEeDRLFCVKFEIPEAKGYP 1414
8****************************************************************************9637**************** PP
STAT 97 fleavskpirCisrsrnt 114
fl++vs+pirCisrs+n
AA31G00726 1415 FLQTVSNPIRCISRSHND 1432
***************984 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF01758 | 9.1E-37 | 129 | 304 | IPR002657 | Bile acid:sodium symporter/arsenical resistance protein Acr3 |
| Pfam | PF01758 | 2.9E-38 | 476 | 653 | IPR002657 | Bile acid:sodium symporter/arsenical resistance protein Acr3 |
| Gene3D | G3DSA:2.60.120.330 | 6.7E-102 | 785 | 1091 | IPR027443 | Isopenicillin N synthase-like |
| SuperFamily | SSF51197 | 1.1E-90 | 787 | 1090 | No hit | No description |
| Pfam | PF14226 | 9.4E-26 | 819 | 919 | IPR026992 | Non-haem dioxygenase N-terminal domain |
| PROSITE profile | PS51471 | 14.419 | 973 | 1073 | IPR005123 | Oxoglutarate/iron-dependent dioxygenase |
| Pfam | PF03171 | 4.4E-27 | 978 | 1073 | IPR005123 | Oxoglutarate/iron-dependent dioxygenase |
| Gene3D | G3DSA:2.60.120.200 | 1.8E-4 | 1116 | 1248 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
| SuperFamily | SSF49899 | 9.79E-8 | 1121 | 1259 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
| CDD | cd10338 | 3.39E-60 | 1635 | 1736 | No hit | No description |
| Gene3D | G3DSA:3.30.505.10 | 4.7E-8 | 1642 | 1697 | IPR000980 | SH2 domain |
| SuperFamily | SSF55550 | 5.33E-10 | 1643 | 1729 | IPR000980 | SH2 domain |
| PROSITE profile | PS50001 | 9.678 | 1646 | 1715 | IPR000980 | SH2 domain |
| SuperFamily | SSF56112 | 2.56E-71 | 1739 | 1980 | IPR011009 | Protein kinase-like domain |
| Gene3D | G3DSA:3.30.200.20 | 1.9E-20 | 1741 | 1816 | No hit | No description |
| SMART | SM00220 | 7.4E-29 | 1755 | 2003 | IPR000719 | Protein kinase domain |
| PROSITE profile | PS50011 | 37.969 | 1755 | 2016 | IPR000719 | Protein kinase domain |
| Pfam | PF00069 | 1.2E-45 | 1757 | 1959 | IPR000719 | Protein kinase domain |
| PROSITE pattern | PS00107 | 0 | 1761 | 1783 | IPR017441 | Protein kinase, ATP binding site |
| Gene3D | G3DSA:1.10.510.10 | 1.1E-41 | 1817 | 1972 | No hit | No description |
| PROSITE pattern | PS00108 | 0 | 1878 | 1890 | IPR008271 | Serine/threonine-protein kinase, active site |
| Pfam | PF13966 | 1.3E-17 | 2101 | 2185 | IPR026960 | Reverse transcriptase zinc-binding domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006468 | Biological Process | protein phosphorylation | ||||
| GO:0055114 | Biological Process | oxidation-reduction process | ||||
| GO:0016020 | Cellular Component | membrane | ||||
| GO:0004672 | Molecular Function | protein kinase activity | ||||
| GO:0005524 | Molecular Function | ATP binding | ||||
| GO:0016491 | Molecular Function | oxidoreductase activity | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 2301 aa Download sequence Send to blast |
MASAISLNSS SGTLPLKSIC KFKPIPRDPR FISCSRLSSS SLSRELSLKL RSSSVQARVS 60 CRRGFEFLPR CSSSSNGFPV EREKSFGERI ESIGEVVSTA FPIWVALGCL LGLMRPTTFE 120 WVTPGLSIIG LMITMLGMGM TLTLDDLRGA LSMPKELLAG FVLQYSVMPM SGFLVSKLLN 180 LPSHYAAGLI LVACCPGGTA SNIVTYIARG NVALSVLMTA ASTVSAVIMT PYLTAKLAKQ 240 YVTVDALGLL MSTLQVVLLP VLAGAFLNQY FQRVVKFVSP IMPPLAVGTV AILCGNAIGQ 300 NASAILMSGK QVVLAAALLH ILGFLFGYLL ARILGIDVPS SRTISIEVGM QNSVLGVVLA 360 TQHFGNPLTA VPCAVSSVCH SILGSVLAYL LCLEMVKEKN FICTTVSPRR GFEFRPRCSV 420 SSNEFPVERE KSFGEWIESL GEAVSTAFPI WVALGCVLGL MRPVTFEWVT PGWSIIGLTI 480 TMLGMGMTLT LDDLRGALSM PKELLVGFVL QYSVMPLSGF LVSKLLNLPS HYAAGLILVG 540 CCPGGTASNI VTYIARGNVA LSVLMTAAST VSGVIMTPLL TAKLAKQYVT VDALGLLMST 600 LQVVLLPVLA GAFLNQYFQR VVKFVSPIMP PIAVGTVAIL CGNAIGQNAS AILNSGKQVV 660 LASVLLHVSG FLFGYLFSRL LGIDVPSSRT ISIEVGMQNS MLGVVLATQH FGNPLIVVPC 720 AVSCVCHSIV GSALAGIWRR DVPKLHQDPV VLVLLSIFEF LNFEKRMEAE GETRWSSLIV 780 PSVLEMVKDQ NFTTVPPRYI RSDQDQTEIV NDSSLSSEIP VIDMKLLCSI SASDSELKKL 840 DFACKDWGFF QLVNHGIDSC FLEKLETEAQ AFFNLPMEEK RKFWQRSGEF EGFGQVNVVS 900 EDQKLDWGDM FILTTEPIQS RKSHLFSKLP PSFRDTLETY SSEVNTIAKL LFSKMANVLK 960 IKQEEMEDLL ADVWQSIKIN YYPPCPQPDQ VIGLTPHSDA TGLTILFQVN EIEGLQIKKD 1020 NKWVIVKPLR NALVVNVGEI LEIITNGRYR SVEHRVVVNS EKERLSVAAF HSPAKETVIA 1080 PAKSLVDMQK QLMAGASAIQ IDKYSLLENF NVDIEVEDEE YETFSLCFWV YLLNSTTFPS 1140 TIIRQVHSNM SVSAPFLVLD ENKNMMLLPL TLLHMEAPDP IDTASWTKVP NVSTNSEFPL 1200 EKWIHVACEV SRNYMRLLIN GEIVGEQFLT SLVIKDINVE SPQKMSLFSV GGDGYSVQGF 1260 IQSAQVLPAN GHMEYHYRED PPLLLSVYKP SSSNIVLEDD GVWNVVGDEA SCSEIFSLDV 1320 VLSNAIGQTV HKEAEVVASL LYADTGTRVE KTSESESPLL ISHQGIESSA DDRPIKLLNG 1380 RSSFNLRISQ VISKSEEDRL FCVKFEIPEA KGYPFLQTVS NPIRCISRSH NDVRPLDLLH 1440 NTSSNKRGRL SEERVPQIGN GMSMEWRNQE EEISSGDSEN MEMGDSVYMR YTISDSTIFR 1500 YCLGNLTERS LLLKEISSNL SDNEVVEFAN QVSLYSGCSH HSYQIQMARK LISEGRNAWI 1560 LISRNNQHVH WNNAIFEIED HFMRISKCSS RSLTHQDFEL LRRISGCYEY ITQENFEKMW 1620 CWLFPVASSI SRSLINGMWR ATSPKWIEGF ITKEEAEHSL QGQEPGTFIL RFPTSRSWPH 1680 PDAGSLVATY VAHDFSLHHK QLRINNICES ASDRYMDAKP LQDMLLAEPE LSRLGRSPLL 1740 NSVSSDMFMK KTHKLSNKDI LGSGGFGTVY RLTIDDSLAF AVKRLNKGTS ERERGFHREL 1800 EAMADIKHRN IVTLHGYYTS PHYNLLIYEL MPNGSLDSYL HGRKCSDKKV LNWAARLKIA 1860 VGAARGISYL HHDCIPHIIH RDIKSSNILL DEKMEARVSD FGLATLMEPN KTHVSTFVAG 1920 TFGYLAPEYF DSGKATMKGD VYSYGVVLLE LLTGRKPTDD EFFEEGTKLV TWVKGVVRDQ 1980 REEVVIDNRL RGSPVQEMNH VFGIAMMINS GDQALFWRDK WTNSGPLITE IGATGPLISG 2040 ISIDAMVKQA SANGQWKLPT RTSRTVARLK SLIPTAPPPM TSHDLDEYLW KHSPTISSTK 2100 FSSAHTWRSL APLLPIVEWF SGVWFSEAIP KHSFTTWVAT WNRLPTRDRL RSWGLDVPPQ 2160 CLLCDNGLES VDHLFLHCRL ARDLWESLLG HSQSHHYNLQ TLTQLILSVQ KPVPSPEASK 2220 LNRLICQAIV YEIWKERNAR LHNNNSRTPA ALCKDIRSTI KNNLISMSQE PQKVQTSLQL 2280 LELWFTTFSS APPPPPRSLR S |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 5o7y_A | 2e-98 | 780 | 1086 | 18 | 330 | Thebaine 6-O-demethylase |
| 5o9w_A | 2e-98 | 780 | 1086 | 18 | 330 | Thebaine 6-O-demethylase |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | AA31G00726 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Malvids | OGEM5205 | 26 | 45 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G78540.2 | 0.0 | SH2 domain protein B | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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