PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA30G00209
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family G2-like
Protein Properties Length: 351aa    MW: 40248.6 Da    PI: 8.6017
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA30G00209genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.9e-31209262255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +r+rW++eLH++Fv+a+++LGG+++AtPk+i++lm+v+gLt+++vkSHLQkYR+
  AA30G00209 209 QRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMQVDGLTNDEVKSHLQKYRI 262
                 8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.24E-17205266IPR009057Homeodomain-like
PROSITE profilePS5129412.894205265IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.9E-28205266IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-24209262IPR006447Myb domain, plants
PfamPF002492.7E-8210261IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010092Biological Processspecification of organ identity
GO:0010629Biological Processnegative regulation of gene expression
GO:0048449Biological Processfloral organ formation
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MVETDTDRRM GLNLNLSMYS LPKPLSKFIE EVSKIEDNQS KVSEIDGYVM KLEEERRKID  60
VFKRELPLCM ILLNEAIGFL KEEAIRCGEM KNKGSVMATN GKFDEIERAK SEIDKKNWMS  120
SAQLWISNPN SQFQSRNGNE DRSMLQNPIQ TSNSSSHGGA FLPFSPPPLP PPLPLMTQEI  180
IDCSRIEQRN QFTKTLQSHH HHHCQKKEQR RRWSQELHRK FVDALHRLGG PQVATPKQIR  240
DLMQVDGLTN DEVKSHLQKY RIYTRKNPSS MVATKAVSSL EQGGYGDKES QSLISLSRSD  300
SPQSPLVGRG LFSNGAHSSE EEEEEEERSE GRSWKKSELK KKKRQVLDLE L
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00475DAPTransfer from AT4G37180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA30G00209
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_568018.11e-151Homeodomain-like superfamily protein
SwissprotF4JRB01e-150HHO5_ARATH; Transcription factor HHO5
TrEMBLA0A178V7R01e-150A0A178V7R0_ARATH; Uncharacterized protein
STRINGXP_010432113.11e-150(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM49222652
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.11e-129G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]