PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021831
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family G2-like
Protein Properties Length: 325aa    MW: 35488.5 Da    PI: 8.7887
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-149779PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.9e-3072125155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Aan021831  72 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 125
                59*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.05969128IPR017930Myb domain
SuperFamilySSF466893.23E-2069129IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-3071130IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-2473125IPR006447Myb domain, plants
PfamPF002491.3E-775124IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MKEDENEANW FSKWEQELPS PDELTPLSQS LITPHLAIAF NIQNNSNSGG DFDSSPPGEL  60
NNTDEPARTL KRPRLVWTPQ LHKRFVDAVA HLGIKNAVPK TIMQLMSVDG LTRENVASHL  120
QKYRLYLKRM QGLSNGGAAG GNGSGGDPAT DHLFASSPVP AHFLRSNSDH YLPYVPVAAL  180
QHQQQQQQQQ MMVAGGGGVQ LQARYGQMGH FGSPRNGQFE HSYLSRQNSS IQQGQVQGVQ  240
RVGTTPVNNS VVSSYGEEVE GANGRKVLTL FPTGDXLTLG VMVKANADIL SSSMMTSNKE  300
NNLLIFTSTT RTKRASAMVN FIQIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A1e-3272128157Transcription factor LUX
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, leaves, stems, petioles, filaments, stigma, pedicels, sepals, anthers, petals, and siliques. {ECO:0000269|PubMed:20331973}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021971195.11e-123transcription factor MYBC1
SwissprotO222101e-57MYBC1_ARATH; Transcription factor MYBC1
TrEMBLA0A2U1L9200.0A0A2U1L920_ARTAN; Homeodomain-like superfamily protein
STRINGXP_010036386.11e-105(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.11e-66G2-like family protein
Publications ? help Back to Top
  1. Sardesai N,Laluk K,Mengiste T,Gelvin S
    The Arabidopsis Myb transcription factor MTF1 is a unidirectional regulator of susceptibility to Agrobacterium.
    Plant Signal Behav, 2018.
    [PMID:24785741]