PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan021809

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Dof

Protein Properties

Length: 398aa MW: 44080.3 Da PI: 7.6981

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41934146	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-13121	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.1	1.4e-36	99	158	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s+ntkfCyynn +++qPr+fCk+C+ryWt+GG++r +PvG+grrk+k++ Aan021809 99 PDKILPCPRCESMNTKFCYYNNSNINQPRHFCKTCQRYWTAGGTMRSMPVGAGRRKKKSQ 158 7899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-27	94	156	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.5E-30	101	157	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.149	103	157	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	105	141	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence Send to blast
MTDPGIILFG KKIGLPESPK TTDPPPFAAA NSDEKMCETI DRHEHRLVTQ HDQRKDECNK 60 PHEELDDNPK TPSIDEEGNQ TSGIDGDPMN LQPRTLKKPD KILPCPRCES MNTKFCYYNN 120 SNINQPRHFC KTCQRYWTAG GTMRSMPVGA GRRKKKSQPS DCRFIITQEA FESAAAANHI 180 EFAADSDGVQ PKVLSFGQNS PHFGARLTSR ENGDACTSGS TVIASNPLVE KTQSNNGFQS 240 QVHWIPGGPW SYNPWNTGMP IPMPIPTVCP PGYPPMPIYH SPYWSSVSWL PPSGSILGKH 300 STDEEARRPN ESHEEPKKQK SSVLTPKTLR IDDPDDAAKS SIWATLGIKN ENSGRGDLFK 360 AFQAKGDEKK KQTATEPSPA YQANPAAFSR SLCFQERA

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence Send to blast

MTDPGIILFG KKIGLPESPK TTDPPPFAAA NSDEKMCETI DRHEHRLVTQ HDQRKDECNK  60
PHEELDDNPK TPSIDEEGNQ TSGIDGDPMN LQPRTLKKPD KILPCPRCES MNTKFCYYNN  120
SNINQPRHFC KTCQRYWTAG GTMRSMPVGA GRRKKKSQPS DCRFIITQEA FESAAAANHI  180
EFAADSDGVQ PKVLSFGQNS PHFGARLTSR ENGDACTSGS TVIASNPLVE KTQSNNGFQS  240
QVHWIPGGPW SYNPWNTGMP IPMPIPTVCP PGYPPMPIYH SPYWSSVSWL PPSGSILGKH  300
STDEEARRPN ESHEEPKKQK SSVLTPKTLR IDDPDDAAKS SIWATLGIKN ENSGRGDLFK  360
AFQAKGDEKK KQTATEPSPA YQANPAAFSR SLCFQERA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024969452.1	0.0	cyclic dof factor 3-like isoform X2
TrEMBL	A0A2U1MWK7	0.0	A0A2U1MWK7_ARTAN; DOF transcription factor 3
STRING	evm.model.supercontig_111.11	6e-94	(Carica papaya)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-72	cycling DOF factor 3