PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021802
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 387aa    MW: 43371.3 Da    PI: 10.5788
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41952312PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-638160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK28.62.8e-0922482046
     RWP-RK 20 dAAkeLgvclTvLKriCRqyGIkRWPh 46
               +AA + gv+ T LKr CR++G++ WP 
  Aan021802 22 QAAESFGVSKTPLKRFCREHGMPSWPL 48
               8*************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS515199.875179IPR003035RWP-RK domain
PfamPF020422.4E-82248IPR003035RWP-RK domain
PROSITE profilePS5174512.386299372IPR000270PB1 domain
SMARTSM006667.3E-6299382IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2402.0E-13299362No hitNo description
SuperFamilySSF542771.37E-12300372No hitNo description
CDDcd059923.02E-12300363No hitNo description
PfamPF005645.9E-10300364IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
GLERGRKRKI DSGTMKAVGQ GQAAESFGVS KTPLKRFCRE HGMPSWPLPK HDERTMGVTD  60
SKLSQKPESK QSLQQSSNGR VDLFGAVLLL VRIKRWSCSS KRHGCSGTWW SCGKHGCPPF  120
KLDSMYQVAR LMLSLKRWRK RHLIKHATQK NNVVASVVSD KLDGTSNKAI RKRKRAVLSF  180
GLEKIRERCG KTMEKAVANL GVGISKLRGM CSSLGMQWWS NRKRLKSVQA NVVISTSEEA  240
PTSVFAASSE PLVTTNITHD HSTLVLHQQQ TNLPDEFAQF EITKRKQFIE DATASAVKNL  300
TIKATYKENM VKFPFTLLDG LERLKEMVAT RFQLRLGSFK LKYVDEEDDM ILIACDTDLM  360
ELVGDTSQPV NQPVTRLLVL PVAPVCA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2U1QHH30.0A0A2U1QHH3_ARTAN; NIN-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-13NIN like protein 7