PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TF ID | Aan021570 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
|
||||||||||||
Family | bHLH | ||||||||||||
Protein Properties | Length: 201aa MW: 22671.7 Da PI: 5.4381 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.1 | 2.1e-05 | 47 | 81 | 15 | 54 |
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +++++++ Lr+++Pk + K++ +iL +++Y+k+L Aan021570 47 EVKDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 81 6899***********66......****************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.88 | 32 | 81 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.88E-6 | 35 | 81 | No hit | No description |
SMART | SM00353 | 9.5E-5 | 41 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-9 | 45 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.19E-9 | 46 | 95 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 201 aa Download sequence Send to blast |
MPGLQGVTVE PEXPEAGQFN IGKNGKNSKV EGQPSKNLMD REKEKEEVKD RLSMLRSIVP 60 KISKMDRTSI LGDTIDYMKE LIEKIKHMQE EMAISSNDQL NSLNAKPKET YIRNSPKFDV 120 ERRNTDTRVQ VCCTGKPELL ISTMTTLETF GLEIHQCVIS CFNDFAMKAS CSEEMEHGLI 180 IESDDIKQAL FRNAGYGGKC L |
Expression -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Broadly expressed. {ECO:0000269|PubMed:17088607}. |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024977267.1 | 1e-102 | transcription factor bHLH93-like | ||||
Swissprot | Q9LSL1 | 2e-71 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A2U1Q8W3 | 1e-128 | A0A2U1Q8W3_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein | ||||
STRING | XP_010275502.1 | 3e-86 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G65640.1 | 6e-73 | beta HLH protein 93 |
Publications ? help Back to Top | |||
---|---|---|---|
|