PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021126
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 328aa    MW: 35761.5 Da    PI: 9.9587
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41957026PU_unrefUnigeneView CDS
gnl|UG|Aan#S41957027PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-75759PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.7e-31257314359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh 
  Aan021126 257 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLIVTYEGDHNHA 314
                99************************988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.9E-15206253IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.1E-33243314IPR003657WRKY domain
PROSITE profilePS5081130.664250316IPR003657WRKY domain
SuperFamilySSF1182907.06E-27252314IPR003657WRKY domain
SMARTSM007745.6E-38255315IPR003657WRKY domain
PfamPF031063.9E-27257313IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
VQSILHDLKQ IMAVDLIMST TTEHNAVQEA ASGLESVQKL IRLLSHQQSS QQVAPDEYQA  60
VADMAVNKFK RVISLLGRTN RELTGHARFR RAPSVNSNNN NNNNNSSSIV IKNSEQDDVV  120
SDESETKVYN PTPIQQVPFV PPPPVMQPAQ AAMFQRKDSL PKTISFSYSP AVSRASSFMS  180
SLTGDSDGKQ LSAGGKPPLC SASCVKRKCS SSENGGSGKC SGGSSGRCQC SKRRKLRMKR  240
VVRVKAISMK LADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR KHVERALDDP  300
SMLIVTYEGD HNHALSIAEA SGLILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21243315273WRKY transcription factor 1
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023761446.11e-179probable WRKY transcription factor 7
SwissprotQ9STX03e-85WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A2U1P1450.0A0A2U1P145_ARTAN; WRKY14
STRINGXP_008238914.11e-123(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-66WRKY DNA-binding protein 7