PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan020823 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 229aa MW: 25545.3 Da PI: 10.1344 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 33 | 82 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g Aan020823 33 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 82 69*******.**********8...557************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.21E-18 | 32 | 91 | No hit | No description |
PROSITE profile | PS51032 | 23.683 | 33 | 90 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.2E-39 | 33 | 96 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-31 | 33 | 91 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-22 | 33 | 92 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.6E-14 | 33 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-11 | 34 | 45 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-11 | 56 | 72 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
EPNNYNNKMS PKNTPSKPNP PTNAAVNNNK EAHFRGVRKR PWGRYAAEIR DPGKKSRVWL 60 GTFDTAEEAA RAYDAAAREF RGCKAKTNFP AENNNNNFSN TNSNTFVKLQ NIKKGNHQHH 120 QQSSTSQGST VDSSTTTEPS LDLNLSSSYN NNNNVAPPVK KIPMYRFPPV TGFFAPQMFY 180 YNGILYSGQV PVFRQTFSDD SNSSSVVDVK PVKERVGLDL NLPPPAELF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 8e-22 | 33 | 90 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 1e-21 | 30 | 95 | 2 | 68 | ATERF1 |
3gcc_A | 1e-21 | 30 | 95 | 2 | 68 | ATERF1 |
5wx9_A | 2e-21 | 34 | 94 | 15 | 76 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways, and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and by Alternaria brassicicola (locally and systemically), but only slightly by ethylene. Strong induction by wounding, cold or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022035987.1 | 3e-56 | ethylene-responsive transcription factor 4-like | ||||
Swissprot | O80340 | 1e-36 | ERF78_ARATH; Ethylene-responsive transcription factor 4 | ||||
TrEMBL | A0A184XQ25 | 1e-124 | A0A184XQ25_ARTAN; ERF/AP-2 like transcription factor |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 3e-23 | erf domain protein 9 |