PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020729
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 469aa    MW: 51185.1 Da    PI: 7.133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41959497PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-22160990PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.23.9e-29192248360
                -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                DgynWrKYGqK vkg++f rsYY+Ct+++Cp++k+vers+ d++++ei Y  +H+h+k
  Aan020729 192 DGYNWRKYGQKLVKGNTFVRSYYKCTFSNCPARKQVERSH-DGNITEINYLWKHEHPK 248
                9***************************************.***************85 PP
2WRKY106.11.8e-33368425259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                +Dg++WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++d+k+v++tYeg+H+h+
  Aan020729 368 NDGFRWRKYGQKLVKGNPNPRSYYRCSSAGCPAKKHVERASHDEKMVITTYEGRHDHD 425
                8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-26186249IPR003657WRKY domain
SuperFamilySSF1182907.98E-24188249IPR003657WRKY domain
SMARTSM007741.1E-29190248IPR003657WRKY domain
PfamPF031068.0E-23192247IPR003657WRKY domain
PROSITE profilePS5081122.297192249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-35353427IPR003657WRKY domain
SuperFamilySSF1182901.07E-28359427IPR003657WRKY domain
PROSITE profilePS5081135.909362427IPR003657WRKY domain
SMARTSM007749.2E-39367426IPR003657WRKY domain
PfamPF031061.0E-26368424IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MDKAPENLEL TNEPKSKHQS SPTKDQSSPT KDQSSPPKDQ SSPSKDQSSP SKDQSSPSKD  60
QTALSNQEIK SESIIAQESH DSGSNASHPN QEGSSTTVLP EKELDSQIHT GSTVSESIQE  120
GNALAIIPKN SPNSSPRTPA SEHDRENFIV SLRPEKVLDK LPLRRHADTV SPAAQSDSGV  180
TFSKLPEKPT GDGYNWRKYG QKLVKGNTFV RSYYKCTFSN CPARKQVERS HDGNITEINY  240
LWKHEHPKPP HTLLKGSAFV LPVQSTGSDE PSLTTSEGHS SVLPAKSHDP EASETETRQL  300
QVVPSSQNVA EVAVSRSNDM RSEVNNDVSS DSKRQKRDSS NMNEGISTKT NCEPRVVVQT  360
TSAVDIINDG FRWRKYGQKL VKGNPNPRSY YRCSSAGCPA KKHVERASHD EKMVITTYEG  420
RHDHDMPAAG RTVTPNMSGT GTGTTSVDND GSRPTESGAM DMVLHVSAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-36192427275WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024979994.10.0probable WRKY transcription factor 33 isoform X1
RefseqXP_024979995.10.0probable WRKY transcription factor 33 isoform X1
TrEMBLA0A2U1PTA00.0A0A2U1PTA0_ARTAN; DNA-binding WRKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.27e-67zinc-dependent activator protein-1