PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020395
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 333aa    MW: 38200 Da    PI: 4.6733
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41932239PU_unrefUnigeneView CDS
gnl|UG|Aan#S55021264PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-372160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-1885135255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g++ AeIr p +  k++r +lg+f+t+e+Aa a+++a+ k++g
  Aan020395  85 RYRGVRRRP-WGKFTAEIRNPEK--KKARLWLGTFDTPEQAALAYDRAAFKFHG 135
                7********.**********733..46*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.14E-2285144IPR016177DNA-binding domain
PfamPF008472.0E-1385135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-3085143IPR001471AP2/ERF domain
PROSITE profilePS5103224.47485143IPR001471AP2/ERF domain
SMARTSM003807.2E-3585149IPR001471AP2/ERF domain
PRINTSPR003673.8E-108697IPR001471AP2/ERF domain
CDDcd000189.12E-2593143No hitNo description
PRINTSPR003673.8E-10109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MFSLQTLSTF EYPGPEYNRS HLSDSSFGKM FPMMNQDDHD DDSQEKCHEP LFCASFLEGS  60
EAEAEAKKKK KSSPDRETSE VEWRRYRGVR RRPWGKFTAE IRNPEKKKAR LWLGTFDTPE  120
QAALAYDRAA FKFHGSRAKV NFPLLIGCDD RSTMVPPMQK TTQEPHQPSS SMSSSSSSIE  180
NGHRKSNNHT LDHLSTTTNK VENDHDPLQD LHLYTPYDFL LNQEVVAPPN TSTTTNMNET  240
EDRKDNDSLW SIFLQSTVQS PTATVTSRAE EVGGFRDSMW DFQLNTVEPE ELRMVEPPPE  300
TNTDVRTSEV GTDHDSFWDF QMDTLTDDDF LFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2684146163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-2684146466ATERF1
3gcc_A5e-2684146466ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024989010.11e-147ethylene-responsive transcription factor 15-like
TrEMBLM4IWN30.0M4IWN3_ARTAN; ORA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.19e-24ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Lu X, et al.
    AaORA, a trichome-specific AP2/ERF transcription factor of Artemisia annua, is a positive regulator in the artemisinin biosynthetic pathway and in disease resistance to Botrytis cinerea.
    New Phytol., 2013. 198(4): p. 1191-202
    [PMID:23448426]