PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan020144 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23060.8 Da PI: 7.1368 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 44 | 94 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f+ +e+Aa+a++ a+ +++g+ Aan020144 44 TYHGVRKRS-WGKWVSEIREPRK---KSRIWLGSFDNPEMAARAHDVAAIAIKGH 94 69****888.**********843...6***********************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.4E-11 | 44 | 94 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.3E-30 | 44 | 102 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-20 | 44 | 102 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.128 | 44 | 101 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.8E-34 | 44 | 107 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.73E-31 | 45 | 103 | No hit | No description |
PRINTS | PR00367 | 7.0E-9 | 45 | 56 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.0E-9 | 67 | 83 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MDKHNKTTTS SSKAATKIKK EGEISEEFSK KTKKSTIHNG ENPTYHGVRK RSWGKWVSEI 60 REPRKKSRIW LGSFDNPEMA ARAHDVAAIA IKGHSAILNF PHLAHQLPKP ASTSPSDIQA 120 AAIKAAALVI NEISPRNHDF NISQAELVPE VGSLGSLDDT YLDLPDLFID LGHRIDXILY 180 TLPEYIAGIE TSDSDLWPGE HFLWNHC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-19 | 41 | 102 | 11 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcriptional activator. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Slightly induced by cold stress. {ECO:0000269|PubMed:11798174}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022027072.1 | 1e-83 | ethylene-responsive transcription factor ERF039-like | ||||
Swissprot | Q39127 | 2e-43 | TINY_ARATH; Ethylene-responsive transcription factor TINY | ||||
TrEMBL | A0A2U1LZ28 | 2e-99 | A0A2U1LZ28_ARTAN; DNA-binding domain-containing protein | ||||
STRING | XP_008448820.1 | 4e-49 | (Cucumis melo) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35700.1 | 3e-32 | ERF family protein |
Publications ? help Back to Top | |||
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