PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan020089 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||
Protein Properties | Length: 293aa MW: 32369.5 Da PI: 8.699 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.5 | 1.8e-30 | 141 | 199 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r a+d++++++tYeg+Hnh+ Aan020089 141 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRWADDQTILVTTYEGTHNHP 199 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.2E-32 | 125 | 201 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.84E-28 | 133 | 201 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.31 | 135 | 201 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-35 | 140 | 200 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.6E-27 | 142 | 199 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MYLQVSNNYN ALQVQFVALM QQQEQDMRNE IIQKQEQKVD NLAQQVSVAV PRQFMEMTSH 60 GSSSEEKTLS GSGLNTAELS KNVDIDGKTV RREDHPRFKC VDIKXKFLDW LSLKTMSETN 120 DATMRKVRVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAT GCPVRKQVQR 180 WADDQTILVT TYEGTHNHPL PPAAVAMAST TSAAATMLLS GSMSSSDGYM NPNILAQAIR 240 PGSSGIASIS ASAPFPTITL DLTHPPNTLQ TLNATPFEGH PSSQYFQPPS AMP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-22 | 128 | 203 | 2 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024985839.1 | 1e-138 | probable WRKY transcription factor 31 | ||||
Swissprot | Q9XEC3 | 5e-89 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A0F6P9L0 | 1e-164 | A0A0F6P9L0_CHRMO; WRKY42 | ||||
TrEMBL | A0A2U1PTE3 | 1e-162 | A0A2U1PTE3_ARTAN; WRKY42 | ||||
STRING | cassava4.1_024001m | 3e-95 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 2e-75 | WRKY family protein |