PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan019797 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||
Protein Properties | Length: 241aa MW: 26311.9 Da PI: 10.7677 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 82 | 5.9e-26 | 164 | 222 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+W+KYG K+v g++fpr YY+C s gCp++k+ve s +d k++++tY geH+h+ Aan019797 164 ADDYSWKKYGEKKVSGTQFPRVYYKCNSVkGCPARKRVELSLTDSKMLIVTYDGEHQHP 222 69************************8877****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.6E-26 | 158 | 223 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.719 | 158 | 224 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-22 | 162 | 223 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-26 | 163 | 223 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.8E-23 | 165 | 222 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MAVDLVGIQT IEHLNRIFQN HDFGGSSSFR EAVSALKRSG HARFRRGPSH APSSVQHAPS 60 VSKKNEEKVT EVTSSVMSSF AGGDLEGSVS NGKSLGIVSP APSFSSRKPP LPSSHRKRSG 120 NDLTSASVHG SRTGCHCCKR RKTGSKRKVK MIPIIGSKVD SIPADDYSWK KYGEKKVSGT 180 QFPRVYYKCN SVKGCPARKR VELSLTDSKM LIVTYDGEHQ HPHRQPTPLP VSMTGLRIDS 240 K |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-15 | 158 | 222 | 7 | 77 | Disease resistance protein RRS1 |
5w3x_D | 2e-15 | 158 | 222 | 7 | 77 | Disease resistance protein RRS1 |
Search in ModeBase |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Regulates rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000, probably by activating the jasmonic acid (JA)- signaling pathway (PubMed:26433201). {ECO:0000250, ECO:0000269|PubMed:26433201}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Strongly during leaf senescence (PubMed:11722756). Repressed by rhizobacterium B.cereus AR156 in leaves, and to a lower extent, by P.fluorescens WCS417r (PubMed:26433201). {ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:26433201}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021996867.1 | 1e-122 | WRKY transcription factor WRKY51-like | ||||
Swissprot | Q9SV15 | 2e-43 | WRK11_ARATH; Probable WRKY transcription factor 11 | ||||
TrEMBL | A0A2U1N8R5 | 1e-176 | A0A2U1N8R5_ARTAN; WRKY3 | ||||
STRING | EMJ23400 | 2e-57 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 7e-46 | WRKY DNA-binding protein 11 |