PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019311
Common NameERF1
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 253aa    MW: 27379 Da    PI: 7.4151
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S59016692PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-151683PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-20133183255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a++ a+ +++g
  Aan019311 133 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAATAYDIAAYRMRG 183
                8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.4E-32132192IPR001471AP2/ERF domain
CDDcd000188.11E-32132192No hitNo description
SMARTSM003801.5E-36133197IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-23133193IPR016177DNA-binding domain
PfamPF008471.8E-13133183IPR001471AP2/ERF domain
PROSITE profilePS5103224.645133191IPR001471AP2/ERF domain
PRINTSPR003676.7E-11134145IPR001471AP2/ERF domain
PRINTSPR003676.7E-11157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MMQMPSFGLE PFPVSNSGDV PVFCRSASFS SLVPCLTEKW GDLPLKVDDS EDMVIYGILR  60
DAVSVGWTPF NFSVKDVKSE PTEIKAEPVD ITDILAKSVV TSALLESGPK VEEVVLSSAS  120
ASTSVAAPPK GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTYETAEEA ATAYDIAAYR  180
MRGSKALLNF PHRIGLNEPE PVRVTSKRRS PEPSSSVSSA SSSKRRNTKV SLAEVVEPEV  240
QSRSSNMSEA VSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-35130198270ATERF1
3gcc_A2e-35130198270ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.81440.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots and at low levels in buds and leaves. Not expressed in cell culture. {ECO:0000269|PubMed:7756828}.
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024976426.11e-121ethylene-responsive transcription factor 2-like
SwissprotQ404792e-93ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLG8GKQ70.0G8GKQ7_ARTAN; AP2/ERF transcription factor
STRINGXP_009606945.19e-92(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-50ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]
  2. Yu ZX, et al.
    The jasmonate-responsive AP2/ERF transcription factors AaERF1 and AaERF2 positively regulate artemisinin biosynthesis in Artemisia annua L.
    Mol Plant, 2012. 5(2): p. 353-65
    [PMID:22104293]