PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019080
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 440aa    MW: 50315.6 Da    PI: 6.7862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55077633PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-124186PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18958255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +g+++AeIrdp     +  +r++lg+f+ta eAaka+++a+ ++++
  Aan019080  9 RYRGVRKRP-WGKYAAEIRDP-----KvgARVWLGTFDTAIEAAKAYDKAAFQMRK 58
               59*******.**********9.....335************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.774966IPR001471AP2/ERF domain
PfamPF008472.5E-12958IPR001471AP2/ERF domain
CDDcd000184.36E-30966No hitNo description
Gene3DG3DSA:3.30.730.108.0E-30967IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-20968IPR016177DNA-binding domain
SMARTSM003802.1E-32972IPR001471AP2/ERF domain
PRINTSPR003674.6E-101021IPR001471AP2/ERF domain
PRINTSPR003674.6E-103248IPR001471AP2/ERF domain
PfamPF127761.3E-10149240IPR024752Myb/SANT-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MDEEESKIRY RGVRKRPWGK YAAEIRDPKV GARVWLGTFD TAIEAAKAYD KAAFQMRKSK  60
AILNFPLEIG LLFNEQVTVA AFQGETSGCR KRTRPEDQDN ALNGEDGFRR LPIVVHGSGT  120
SISQQSLSPL AVTPPMGLTY ADGKTEPFKW TDQYVLAFCD IINQYHMRNE RNSPYKWTSL  180
QLEFEKIVHH KLKSEKVLRK KFDSMRNDYN LWKSLKNGEN GISWNVSTGK LDCSDDWWRK  240
KIKENPNVKR FKKKQPSIQL QEAWYRLFED DVVNQVGCVT PSIYPNTLKE VHHLNLEVED  300
VEHDDCVDGS SPSEDLETQK DTFLKETRND DISSPNQSEG SKHSQKTAKM STQQDDTQQC  360
VLKTMESDSS TVNHAGNYSI SGAISVINRM VDEGLMTTCS ELWCFAISLF EDAVKRELFL  420
SLPDDAGRLA WLQYKQNLGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-251069363ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.90490.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022015720.11e-143uncharacterized protein LOC110915349
TrEMBLA0A2U1KBX60.0A0A2U1KBX6_ARTAN; DNA-binding domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-22ethylene responsive element binding factor 5