PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan018890
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 293aa    MW: 32438 Da    PI: 6.2438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41937134PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-4068PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-2097147155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                ++y+GVr+++ +g+W+AeIrdp++   r r +lg+++taeeAa  +++a+ +l+g
  Aan018890  97 KKYRGVRQRP-WGKWAAEIRDPVK---RVRLWLGTYDTAEEAAMVYDHAAIQLRG 147
                59********.**********755...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.59E-3197154No hitNo description
SMARTSM003807.1E-3898161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-3098155IPR001471AP2/ERF domain
PfamPF008471.1E-1298147IPR001471AP2/ERF domain
PROSITE profilePS5103223.69698155IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-2298155IPR016177DNA-binding domain
PRINTSPR003678.9E-1199110IPR001471AP2/ERF domain
PRINTSPR003678.9E-11121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MCDSIKFTEH KTHTTISGAC TPRVVRISLT DHYATDSSSD ESSCDRKRVK KFVKELKFEN  60
TATERVTSRK KKVAAYNDVT AVKTKVVNKN VTVKNGKKYR GVRQRPWGKW AAEIRDPVKR  120
VRLWLGTYDT AEEAAMVYDH AAIQLRGPHA LTNFTLPPPA RENHAPATSF SEEYSHSHKA  180
VKSPKSVLRS ASALTDESTA ESTQNESNDD VAVSGSFSGF HCFDTPPFER CSDDLFDDFP  240
GLFDPGMDAG PGFGNTDPIF IEPGFDDGFG SWGADEYFNE FGDVFGSDPL VSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2296156364ATERF1
3gcc_A3e-2296156364ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022021857.11e-102ethylene-responsive transcription factor CRF2-like
TrEMBLA0A2U1LFN60.0A0A2U1LFN6_ARTAN; AP2/ERF transcription factor ERF/PTI6
STRINGXP_009603046.18e-70(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.21e-46cytokinin response factor 2