PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan018831
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 186aa    MW: 20091.3 Da    PI: 4.5458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-264160992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.69.4e-11858356
        AP2  3 ykGVrwdkkrgrWv...AeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               y+GVr ++  g      +eI+      k++r++lg+f tae+Aa+a++aa+ +l+ge
  Aan018831  8 YRGVRKRP-VGTNTltkSEIQL-----KKARVWLGTFNTAEDAARAYDAAAINLRGE 58
               77777777.3441111234444.....46**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.728765IPR001471AP2/ERF domain
PfamPF008476.9E-7758IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-15766IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-22765IPR001471AP2/ERF domain
SMARTSM003802.4E-22771IPR001471AP2/ERF domain
PRINTSPR003671.1E-7819IPR001471AP2/ERF domain
PRINTSPR003671.1E-73147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
PSATAIRYRG VRKRPVGTNT LTKSEIQLKK ARVWLGTFNT AEDAARAYDA AAINLRGEKA  60
KTNFSANFDE EDVLVGQHQH QRPTSSSMSS TVDESLSGPR VPVVGKDKPV VKLKPVVVGV  120
GNDDECCDYC DSSSSVVVDE GDDEVECVEN DSKKSVFMFD LNELPPMDDE RGGGSLLHGA  180
SSLIDD
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024959998.13e-33ethylene-responsive transcription factor 3-like
SwissprotO803394e-19ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A2J6JRU25e-30A0A2J6JRU2_LACSA; Uncharacterized protein
STRINGXP_004513889.12e-25(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-11ERF domain protein 11
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]