PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan018789
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family S1Fa-like
Protein Properties Length: 282aa    MW: 30947.9 Da    PI: 4.5396
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-629160989PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA126.29.8e-401378368
       S1FA  3 vakveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavP 68
               +++vea G+nPGlivllvvggll++flvgny+ly+yaqk+lPPrkkkPvskkklkreklkqGva+P
  Aan018789 13 NKNVEATGINPGLIVLLVVGGLLITFLVGNYVLYMYAQKTLPPRKKKPVSKKKLKREKLKQGVAAP 78
               5689*************************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046891.6E-361678IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDQDSDRSQQ FANKNVEATG INPGLIVLLV VGGLLITFLV GNYVLYMYAQ KTLPPRKKKP  60
VSKKKLKREK LKQGVAAPEN RPSSENQAXD DRAYNVRKHS GVSSLDSSQS REKTSDESVI  120
CLSKPESVSS TESSDGGSSR RTENLLDLDP VNELYFEQKI SVSPSLLNQK VQNPNEAACF  180
PSELYMPAIS QMNGNSGSSR MMSTPLLTTD HFDIKDPPNV SSGPQKTIDY EGCFQHDGGN  240
KITENTTDYG ENDGNHCGTE TSENEGEEDE LFGAMFDLSE EG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.73731e-136trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024981377.13e-55autophagy-related protein 18g isoform X1
RefseqXP_024981379.12e-55autophagy-related protein 18g isoform X3
RefseqXP_024981380.12e-55autophagy-related protein 18g isoform X4
RefseqXP_024981381.11e-55autophagy-related protein 18g isoform X5
TrEMBLA0A2U1P0E01e-127A0A2U1P0E0_ARTAN; ATG18-like protein