PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan017999

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 476aa MW: 54153.5 Da PI: 8.6408

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-9966	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	42.1	1.7e-13	422	463	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 ++ e ++++F +pi +A+k Lgv+ + LKr CR+++I WP Aan017999 422 CVTREAIQQNFGKPIGEASKRLGVSRSSLKRVCRKLNITSWP 463 57899************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.878	406	476	IPR003035	RWP-RK domain
Pfam	PF02042	6.9E-13	423	463	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence Send to blast
XRHVIQFWSL YSIGKYKFLK TVNQPFGLGI YEEALCSYRK ESERTWFPVD AKCQEHDLIP 60 AVRVFKRGLP EWTSDVTKGY SRNHPLQDCA IRSNLHGYLV LPVFDSFTMS CVGVLESITS 120 SKYFDCAYEV QQIHRALKAA NLTSPQAFDF FPTSYVDCNN TQREQDEIFK TLKDVCVAYK 180 LPLAQTWTIS SKSSFVATGR NIEMTCSSFN SNCIGKICMS TTALPFYVHD LRFWLFREAC 240 KEHHLLKSHG VVGRALSSHG SCFCADVTKL DDDEYSLVHN ARMNGLASCF AIYLHGVEHD 300 SYVLEFFLPV DMKEVADLQN LVQKVKLRLK MSSFVLGDVS TTDLDVSQLS LQMQLNSKDS 360 ATVGKTNAET HCINAKDQST FSNNDLKSWN NGTNTDELYV NGVTRNKFDI VTKQRRKHKQ 420 DCVTREAIQQ NFGKPIGEAS KRLGVSRSSL KRVCRKLNIT SWPLPHRHKK HAHLSI

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence Send to blast

XRHVIQFWSL YSIGKYKFLK TVNQPFGLGI YEEALCSYRK ESERTWFPVD AKCQEHDLIP  60
AVRVFKRGLP EWTSDVTKGY SRNHPLQDCA IRSNLHGYLV LPVFDSFTMS CVGVLESITS  120
SKYFDCAYEV QQIHRALKAA NLTSPQAFDF FPTSYVDCNN TQREQDEIFK TLKDVCVAYK  180
LPLAQTWTIS SKSSFVATGR NIEMTCSSFN SNCIGKICMS TTALPFYVHD LRFWLFREAC  240
KEHHLLKSHG VVGRALSSHG SCFCADVTKL DDDEYSLVHN ARMNGLASCF AIYLHGVEHD  300
SYVLEFFLPV DMKEVADLQN LVQKVKLRLK MSSFVLGDVS TTDLDVSQLS LQMQLNSKDS  360
ATVGKTNAET HCINAKDQST FSNNDLKSWN NGTNTDELYV NGVTRNKFDI VTKQRRKHKQ  420
DCVTREAIQQ NFGKPIGEAS KRLGVSRSSL KRVCRKLNIT SWPLPHRHKK HAHLSI

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.18645	0.0	leaf

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021969892.1	0.0	protein NLP7-like
TrEMBL	A0A2U1NXG5	0.0	A0A2U1NXG5_ARTAN; PB1 domain, RWP-RK domain protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-80	Nin-like family protein