PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017692
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 178aa    MW: 19714.2 Da    PI: 5.6462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-140160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.3e-182372255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr +k +g+Wv+eIr p+    +  r++lg+++t+e+Aa+a +aa  +l+g
  Aan017692 23 KYTGVRKRK-WGKWVSEIRLPK----CrDRIWLGSYDTPEKAARAFDAALFCLRG 72
               8*****999.**********83....67*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.3E-202381IPR016177DNA-binding domain
PROSITE profilePS5103221.1932380IPR001471AP2/ERF domain
CDDcd000182.79E-292382No hitNo description
SMARTSM003801.2E-332386IPR001471AP2/ERF domain
PfamPF008472.7E-112372IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-282381IPR001471AP2/ERF domain
PRINTSPR003674.5E-92435IPR001471AP2/ERF domain
PRINTSPR003674.5E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
XLSSGGSRDR SSNSSTESER ANKYTGVRKR KWGKWVSEIR LPKCRDRIWL GSYDTPEKAA  60
RAFDAALFCL RGSTANFNFP HQPPHIPGGT SLSRSQIQAV AASYASGSST DCITTHDLLS  120
SSTSTSSSEE EEESPSPYYV SQLQTDQSDP WTFPLTNLDD DFNSYMNTLG DHTIIVER
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1722821374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021990593.17e-51ethylene-responsive transcription factor ERF017-like
SwissprotQ84QC21e-42ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A2U1NC121e-103A0A2U1NC12_ARTAN; AP2/ERF domain-containing protein
STRINGXP_010687541.11e-44(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-44ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Li SJ, et al.
    The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
    Sci Rep, 2016. 6: p. 20151
    [PMID:26837571]
  3. Yin XR, et al.
    Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
    Plant J., 2016. 86(5): p. 403-12
    [PMID:27037684]