PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017504
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 308aa    MW: 35107.1 Da    PI: 10.0742
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-112292PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK30.29.1e-10135184448
     RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW.....PhRk 48 
                e+s ed+++++ +++k+AAkeLgv+l++LKr+  ++G++ W     P+Rk
  Aan017504 135 ELSREDIEQHYGKTMKKAAKELGVSLSTLKRKHNKLGMSGWqgpdlPQRK 184
                7999*********************************9999666666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020421.1E-10136187IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.602.9E-4143172IPR009057Homeodomain-like
SuperFamilySSF542779.81E-10214282No hitNo description
PfamPF005644.0E-7219287IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.5E-11220281No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
XARHDASSID RVALNQFVRI REHTQKQKNS SRPVAANRNT NKYRXIPNYV LLLETLLLTL  60
KRCLPRFNFA SGAELGNQLR VIDVDSSTKS ETKYFKIFKE KRLSPIPEAI DKGKKAMVVN  120
YNARSKVKRD TTEIELSRED IEQHYGKTMK KAAKELGVSL STLKRKHNKL GMSGWQGPDL  180
PQRKANKSNK NQSKESHTHE KDNGVIQDPS PVKRNENTVI KAEYADDIIK LHLRISEATF  240
VTVENEIGKR FKLEDGTFKI KFLDKDEEWI LMDSDQXLEL LYTKFEKCCS STACASTQAV  300
AGPVGFCX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15862TLKRC
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.184730.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023749271.14e-66protein NLP7-like isoform X1
RefseqXP_023749273.12e-66protein NLP7-like isoform X2
TrEMBLA0A2U1N1Z31e-130A0A2U1N1Z3_ARTAN; NIN-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-10NIN like protein 7