PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017464
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Dof
Protein Properties Length: 289aa    MW: 31996.9 Da    PI: 8.1858
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-333160991PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.75.9e-393998362
     zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                +alkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s+
  Aan017464 39 PQALKCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSK 98
               6899****************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.9E-334096IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-254191IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.734296IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104480IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MQDIHSIGNR GGPRLFGSAG DADRRLRQHH QHHHGHHTPQ ALKCPRCDSS NTKFCYYNNY  60
NLSQPRHFCK SCRRYWTKGG VLRNVPVGGG CRKTKRSKTK TRNSSLEASD SRKTANSNSS  120
SDSSSLTANT TASTPAPVPA LAPAPAPTPA PAPTNTTKNI TNSTLINFQK PDTQFMSPDP  180
NFNPENTLFS DIGTFTSLIT SSTTQLPFSP FKLHHESGEK SDWTHGDVLK GSETTSSLGF  240
MDGQNWNNGT DQGLFDLTGS VDHHESYWST TQWDDHAHEN DQHELDYLR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024976982.16e-69dof zinc finger protein DOF5.4
TrEMBLA0A2U1Q7L41e-170A0A2U1Q7L4_ARTAN; DOF transcription factor 18
STRINGXP_010101639.15e-55(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.11e-31OBF binding protein 4