PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan017296 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||
Protein Properties | Length: 324aa MW: 35833 Da PI: 8.9113 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95 | 5.5e-30 | 162 | 221 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ Aan017296 162 VKDGYQWRKYGQKVTRDNPSPRAYFKCSHApSCPVKKKVQRSVEDQSILVATYEGEHNHP 221 58***************************99****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.9E-29 | 156 | 222 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.1E-25 | 161 | 222 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 25.786 | 161 | 223 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-34 | 162 | 222 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-24 | 163 | 221 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MEYTSLVNTS LDLNSNPRNF LSLVPKKEVP NNFIELGLRM SPVKDEQAAS ALVDELNRVS 60 AENKKLTEML TVMCENYNAL QNHLADYMAK NPGPSDSTNN SSRKRKLESP TNQVMINNER 120 GNSESSSSDE DSCKKPRQEQ HIKAKISRVC VRTEASDTGL LVKDGYQWRK YGQKVTRDNP 180 SPRAYFKCSH APSCPVKKKV QRSVEDQSIL VATYEGEHNH PSQSKHEQAS SGLNRTVTST 240 TLGSASLSSS GPTITLDLTT PPKPPTNPSD ETKVGGDRRV DTPEFQQFLV DQMASSLTKD 300 PSFKAALAAA ISGRMVQQNQ SQKW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-19 | 161 | 220 | 16 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 2e-19 | 161 | 220 | 16 | 74 | Probable WRKY transcription factor 4 |
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Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.4158 | 0.0 | trichome |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250|UniProtKB:Q9SUP6}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023744098.1 | 0.0 | probable WRKY transcription factor 40 | ||||
Swissprot | Q9SAH7 | 5e-96 | WRK40_ARATH; Probable WRKY transcription factor 40 | ||||
TrEMBL | D8WUJ0 | 0.0 | D8WUJ0_ARTAN; WRKY transcription factor | ||||
STRING | cassava4.1_011696m | 1e-122 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-87 | WRKY DNA-binding protein 40 |