PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||||||
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TF ID | Aan016800 | ||||||||||||||||
Organism | |||||||||||||||||
Taxonomic ID | |||||||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||||||
Protein Properties | Length: 370aa MW: 41564.6 Da PI: 7.7358 | ||||||||||||||||
Description | WRKY family protein | ||||||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.7 | 1.5e-30 | 50 | 106 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk se+prsYY+Ct+++Cpvkkkv ++ d+++ +i+Y+g+Hnh+ Aan016800 50 NDGYNWRKYGQKQVKASEHPRSYYKCTHPNCPVKKKVGQAL-DGHISDIVYKGKHNHD 106 8***************************************9.***************7 PP | |||||||
2 | WRKY | 104.4 | 6.2e-33 | 267 | 325 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+ dpk v++tYeg+Hnh+ Aan016800 267 LDDGFKWRKYGQKVVKGNTNPRSYYKCTFPGCNVRKHVERAPLDPKSVVTTYEGKHNHD 325 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 21.999 | 44 | 108 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.4E-27 | 46 | 108 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.01E-24 | 47 | 108 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-32 | 49 | 107 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-23 | 50 | 106 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.2E-35 | 253 | 327 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-28 | 259 | 327 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 35.496 | 262 | 327 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.7E-38 | 267 | 326 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.3E-25 | 268 | 325 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence Send to blast |
XGLVNEEETR MLNANAELED SQIGSPDELS VSQSDVSESQ HVISGSADIN DGYNWRKYGQ 60 KQVKASEHPR SYYKCTHPNC PVKKKVGQAL DGHISDIVYK GKHNHDPPPP NKRGKESADV 120 NKPNNSQIEA HVAEQPVVDQ GFNQMMRNDQ GFSQLMRSDQ GFHQMARNDQ GYNQLMENVQ 180 GSNQLMGNDQ VSNQLMRNDQ VSNQLMRNDQ GSNQLMRIDE PNDEPNPKRR NTETGSVTVP 240 ADHSTSAHKV VSEPKIVVQT RSEVDLLDDG FKWRKYGQKV VKGNTNPRSY YKCTFPGCNV 300 RKHVERAPLD PKSVVTTYEG KHNHDIPVSR HRGYNNNNGG GGAAARRKEP KLGNNERPVL 360 LQMKEEEITA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-37 | 49 | 328 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 1e-37 | 49 | 328 | 8 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022012682.1 | 1e-166 | probable WRKY transcription factor 4 | ||||
TrEMBL | A0A2U1MGX6 | 0.0 | A0A2U1MGX6_ARTAN; WRKY domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 5e-81 | WRKY DNA-binding protein 3 |