PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016643
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 274aa    MW: 30206.1 Da    PI: 9.2092
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41956678PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-56538PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.24e-29209266260
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                dDgynWr YGqK+vkgse+prsYY+Ct+++C+vkk  ers   ++++ei+Y+g+H+h+k
  Aan016643 209 DDGYNWRIYGQKVVKGSEHPRSYYKCTHPNCEVKKIFERSY-TGQITEIVYKGTHDHPK 266
                8****************************************.9**************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-25206267IPR003657WRKY domain
SuperFamilySSF1182901.16E-23207267IPR003657WRKY domain
SMARTSM007745.0E-29208266IPR003657WRKY domain
PROSITE profilePS5081121.827209267IPR003657WRKY domain
PfamPF031063.2E-22209265IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MNNDDDNNKM MMMNGGGSSR AKYKMMSPAK LPISRSSSSS ITIPPGLSPT SFLESPVLLT  60
NVKAEPSPTT GSFFKSPLMQ RSIGSATFSL DANSSARKTV DENNSGFFEF RPHAQPTSVP  120
QISSAGFQIA AGSNHHLGEP SGQYHHQNQN QNQNHNEPQS YSSPSPSNWE IASPREQSTA  180
LAYMPHEETN GPGKPKDPGP AIQVDRSADD GYNWRIYGQK VVKGSEHPRS YYKCTHPNCE  240
VKKIFERSYT GQITEIVYKG THDHPKPSPS RRFX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-142082671474WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024959929.11e-138probable WRKY transcription factor 20
SwissprotQ93WV02e-59WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A2U1NY821e-156A0A2U1NY82_ARTAN; WRKY family transcription factor family protein
STRINGXP_008227105.13e-75(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.24e-44WRKY family protein