PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan016616

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 424aa MW: 47685.1 Da PI: 10.3368

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55044741	PU_unref	Unigene	View CDS
gnl\|UG\|Aan#S56467951	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-557160989	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	39.9	8.5e-13	154	199	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++++e ++k+ ++pi +AAk+Lgv+ ++LKr CR + ++ WP k Aan016616 154 DSLTMEAVKKHVEKPIDEAAKSLGVSRSTLKRFCRDNKMSSWPLPK 199 689****************************************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.821	140	224	IPR003035	RWP-RK domain
Pfam	PF02042	3.0E-13	155	201	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	1.1E-4	159	223	IPR009057	Homeodomain-like
Gene3D	G3DSA:3.10.20.240	1.0E-16	341	420	No hit	No description
SMART	SM00666	3.4E-13	341	423	IPR000270	PB1 domain
PROSITE profile	PS51745	16.515	341	423	IPR000270	PB1 domain
SuperFamily	SSF54277	9.81E-16	341	420	No hit	No description
Pfam	PF00564	7.4E-15	342	421	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence Send to blast
XLKHSIEIAS GFELGDSIEI VGPLMDLSAN IEPNNIQTSS YLIDTNPQST IISSITTTKT 60 KILETVSSDS ESIVADVAKT NSTHVVNQLS PTQDFLNNNG GTIPSAEIVV HNDVIRENEN 120 TTSNRDIVMQ ITSETITDAG EKSNRKRGRK RKIDSLTMEA VKKHVEKPID EAAKSLGVSR 180 STLKRFCRDN KMSSWPLPKH NKKTARTDSK LSQTSRSKQN LQQSSNVRFG LFGVAILLVR 240 VKRWSCASKR HGFSGNWWSC GKHSHLSFKS DSIYQVARLM VFLKRWKNKK STRHAMQKRD 300 HLENTEKPLN KLNVDWKLPD SNPFYASPKQ IMSNVVSDIR KVTVKATFKN DMIKVQIPIS 360 SRLFELQKEV AHRTKLKSES VRLKYKDEDG DLILLACDAD LQTLLGGYST SNNTTVKLII 420 QADE

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence Send to blast

XLKHSIEIAS GFELGDSIEI VGPLMDLSAN IEPNNIQTSS YLIDTNPQST IISSITTTKT  60
KILETVSSDS ESIVADVAKT NSTHVVNQLS PTQDFLNNNG GTIPSAEIVV HNDVIRENEN  120
TTSNRDIVMQ ITSETITDAG EKSNRKRGRK RKIDSLTMEA VKKHVEKPID EAAKSLGVSR  180
STLKRFCRDN KMSSWPLPKH NKKTARTDSK LSQTSRSKQN LQQSSNVRFG LFGVAILLVR  240
VKRWSCASKR HGFSGNWWSC GKHSHLSFKS DSIYQVARLM VFLKRWKNKK STRHAMQKRD  300
HLENTEKPLN KLNVDWKLPD SNPFYASPKQ IMSNVVSDIR KVTVKATFKN DMIKVQIPIS  360
SRLFELQKEV AHRTKLKSES VRLKYKDEDG DLILLACDAD LQTLLGGYST SNNTTVKLII  420
QADE

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.229	0.0	leaf\| trichome

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022020704.1	1e-139	protein NLP7-like
TrEMBL	A0A2U1N605	0.0	A0A2U1N605_ARTAN; NIN-like protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-15	NIN like protein 7