PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016412
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GRAS
Protein Properties Length: 283aa    MW: 31453.7 Da    PI: 5.0542
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41934444PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-84145PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS53.83.9e-17190276291
       GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                ++lL++cA+ v+++d++ a++ L++++ + sp+g++ qRla+ f+ +L+arl++++s+ly + ++++ s    +e+l+a+++   ++P+ 
  Aan016412 190 KTLLINCAQSVAANDHKVATQQLKQIRLHTSPSGNASQRLAHIFALGLEARLSGTGSHLYTSQKATQIS---AAEKLKAFQACLSACPFK 276
                679*********************************************************887777777...99********999***85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098514.329163283IPR005202Transcription factor GRAS
PfamPF035141.3E-14190276IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
FETKSSVTQA QSVDYHPLVS PTTSVTNDVN DTMDSFIHKH VVQNIFTDSE SILLFKRGME  60
EASKFLPQNK PFLIDLDKYN LPSDSTNVSP NVVVKEESVE MDNGSRGRKH SELEDSDFED  120
ERTTKQSAVY EDEEPELSEL FDKLLLCTND KGEPMPGFGE LANHNNLKNV YNGWNAPWRP  180
GNANDSIDIK TLLINCAQSV AANDHKVATQ QLKQIRLHTS PSGNASQRLA HIFALGLEAR  240
LSGTGSHLYT SQKATQISAA EKLKAFQACL SACPFKQNEI YXA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024968070.11e-134scarecrow-like protein 14
TrEMBLA0A2U1KKK90.0A0A2U1KKK9_ARTAN; GRAS protein
STRINGSolyc06g076280.1.11e-77(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.12e-50SCARECROW-like 14