PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan016410 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | NAC | ||||||||
Protein Properties | Length: 320aa MW: 36995.6 Da PI: 8.6337 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168 | 3.1e-52 | 9 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeelv++yL++k++++++++ +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + v Aan016410 9 LPPGFRFHPTDEELVMHYLCRKCASQTISV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKPV 105 79****************************.88***************6666689*************************************98..789* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+ap+g+kt+W+mheyrl Aan016410 106 GIKKALVFYAGKAPRGVKTNWIMHEYRL 133 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-62 | 5 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.071 | 9 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-27 | 10 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MSSCENLELP PGFRFHPTDE ELVMHYLCRK CASQTISVPI IAEIDLYKFD PWQLPDMALY 60 GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPIG KPKPVGIKKA LVFYAGKAPR 120 GVKTNWIMHE YRLANVDRSA GKRNNNLRLD DWVLCRIYNK KGTLEKHYVD NSSQDNQISE 180 MEVETKPKIT GYTPTPPPLH PPSSVPHHVM NDVFHFDTSE SVPTLHTDSS PEHEREVQSD 240 PKKNEFQFNY IDPFPDDAFT PQSQYYNDYQ LSPLQDMFMY XAKALSNVRC RATSRVWEHF 300 RTIVKQAQTH RALVTRVKSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-82 | 7 | 166 | 13 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024973928.1 | 0.0 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-122 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A1S6M475 | 0.0 | A0A1S6M475_ARTAN; NAC1 | ||||
STRING | EOX92686 | 1e-136 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-111 | NAC family protein |