PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan016169 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | TCP | ||||||||
Protein Properties | Length: 257aa MW: 26993.1 Da PI: 9.9756 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.8 | 1.9e-38 | 22 | 115 | 2 | 95 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa 95 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ + + s++nss+++a ++a Aan016169 22 TVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVAVRSNNNSSITAALDQKA 115 689******************************************************************9986666666666566653333322 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51369 | 27.892 | 28 | 82 | IPR017887 | Transcription factor TCP subgroup |
Pfam | PF03634 | 1.3E-33 | 28 | 125 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MSTDGTTNGV PISSQPGNGV LTVKKPPAKD RHSKVDGRGR RIRMPIICAA RVFQLTRELG 60 HKSDGQTIEW LLRQAEPSII AATGTGTTPA SFSTVSVAVR SNNNSSITAA LDQKAAPPVG 120 HHHHMLSPAP FLLGKRLRAD DEIDKDDGQG GNHMGQAVAV SGGGGGGRGG FWALPARSDF 180 GQVWSFAAAP QDMNSMAAAQ QGRFYQQQQQ QQQVAMGEAS AARVGNYLPI TQGHLNLLAS 240 LQGPPQQSSG GGKDDNE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023736444.1 | 1e-120 | transcription factor TCP7-like | ||||
Swissprot | Q9FMX2 | 4e-84 | TCP7_ARATH; Transcription factor TCP7 | ||||
TrEMBL | A0A2J6K9I8 | 1e-118 | A0A2J6K9I8_LACSA; Uncharacterized protein | ||||
STRING | Solyc04g009180.1.1 | 3e-98 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 3e-62 | TCP family protein |