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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Aan015851 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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| Family | WRKY | ||||||||
| Protein Properties | Length: 240aa MW: 27139.2 Da PI: 6.2761 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 81.2 | 1.1e-25 | 87 | 147 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
Dgy+WrKYGqK + +s+fpr Y+rCt++ gC++ k+v++ ++d +++ei Y g+H++
Aan015851 87 GDGYSWRKYGQKGILNSKFPRCYFRCTHKhvqGCKALKQVQQLEDDSNMFEIRYIGHHTCA 147
5***************************99999*************************996 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 2.0E-25 | 75 | 149 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 18.98 | 81 | 149 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 1.83E-24 | 84 | 149 | IPR003657 | WRKY domain |
| SMART | SM00774 | 5.5E-36 | 86 | 148 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 4.3E-24 | 88 | 146 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 240 aa Download sequence Send to blast |
SAKRLQALLH QKVNDDELAS VDGLVNEISE SFYHGLLVLT PTSTHLGLAC NLVFHGKPPA 60 PASRNDEAVT KEERTIDSRI EVSGTIGDGY SWRKYGQKGI LNSKFPRCYF RCTHKHVQGC 120 KALKQVQQLE DDSNMFEIRY IGHHTCAPPN TSSHHRVVLD SKKFQNRHYS QICSNPSIST 180 NNQNDAFLKQ EDLCYNVSLA NDAQLTPAWV WNEIITDDFD ESFKSDQTLS DISFDDVMFS |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 5w3x_B | 2e-19 | 87 | 150 | 17 | 80 | Disease resistance protein RRS1 |
| 5w3x_D | 2e-19 | 87 | 150 | 17 | 80 | Disease resistance protein RRS1 |
| Expression -- UniGene ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| UniGene ID | E-value | Expressed in | ||||
| Aan.18778 | 0.0 | leaf | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_022006518.1 | 7e-84 | probable WRKY transcription factor 54 | ||||
| TrEMBL | A0A2U1MUT3 | 1e-167 | A0A2U1MUT3_ARTAN; WRKY domain-containing protein | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G56400.1 | 2e-28 | WRKY DNA-binding protein 70 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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