PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan015827

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 408aa MW: 46396.6 Da PI: 9.3206

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-67473	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	38.4	2.4e-12	131	175	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ++isle+++k+ + i AA +L+v ++L r CR++GI RWP Rk Aan015827 131 SSISLEEIEKHIGKLISVAAASLNVTRSTLRRCCRKLGI-RWPGRK 175 689**********************************.9**9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.048	117	199	IPR003035	RWP-RK domain
Pfam	PF02042	1.5E-10	133	177	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.18E-10	306	394	No hit	No description
SMART	SM00666	1.3E-5	313	396	IPR000270	PB1 domain
PROSITE profile	PS51745	13.586	313	396	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	3.6E-10	313	393	No hit	No description
Pfam	PF00564	2.0E-8	315	393	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
XWLLVTISXG YMNLPVFEPN SGCCVGILEL ITSSNCIDYA FEVREVLRAL KGESLRSSIV 60 FQDHSYYVRC VHTQVRDERR QHELDEIQIK PSIFDAAEGT GQSVVPCLDV GIEDFDINPG 120 TTQRNRKKSV SSISLEEIEK HIGKLISVAA ASLNVTRSTL RRCCRKLGIR WPGRKHNDKS 180 NKKNKKKEET ERSVGLKKIT KKHYGRKTMK ELVDILGVVV SRFVKRFRKS RGIFRRPYRN 240 GLDKSDSRRK LGQTEIHTSE EASTSDIGER LCTKNGLATL TEHDKHSSTL VLHQQEPTKQ 300 YNENTAATNT VKTLTIEATY REEIAKFGFR ISDGLVKLEE LVAKRFELNL GSFKLKYVDA 360 DGDLIWIACD IALMESVGEF RQTDHQTVIR LLVLPDEHLP VVHHSPNV

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

XWLLVTISXG YMNLPVFEPN SGCCVGILEL ITSSNCIDYA FEVREVLRAL KGESLRSSIV  60
FQDHSYYVRC VHTQVRDERR QHELDEIQIK PSIFDAAEGT GQSVVPCLDV GIEDFDINPG  120
TTQRNRKKSV SSISLEEIEK HIGKLISVAA ASLNVTRSTL RRCCRKLGIR WPGRKHNDKS  180
NKKNKKKEET ERSVGLKKIT KKHYGRKTMK ELVDILGVVV SRFVKRFRKS RGIFRRPYRN  240
GLDKSDSRRK LGQTEIHTSE EASTSDIGER LCTKNGLATL TEHDKHSSTL VLHQQEPTKQ  300
YNENTAATNT VKTLTIEATY REEIAKFGFR ISDGLVKLEE LVAKRFELNL GSFKLKYVDA  360
DGDLIWIACD IALMESVGEF RQTDHQTVIR LLVLPDEHLP VVHHSPNV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2U1N4P0	0.0	A0A2U1N4P0_ARTAN; NIN-like protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	8e-14	Nin-like family protein