PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015523
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 275aa    MW: 31103.2 Da    PI: 9.0468
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S56551126PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK34.15.5e-113361748
     RWP-RK 17 pikdAAkeLgvclTvLKriCRqyGIkRWP..hRk 48
               ++ +A+++L+v+ ++LKr CR +GI  WP  hRk
  Aan015523  3 SLGEASRCLDVSRSTLKRVCRDLGILTWPlpHRK 36
               7889************************644787 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020421.0E-7236IPR003035RWP-RK domain
SuperFamilySSF542779.48E-16178258No hitNo description
SMARTSM006661.7E-15181264IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2406.6E-16181258No hitNo description
PROSITE profilePS5174516.524181264IPR000270PB1 domain
PfamPF005641.0E-14182262IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
XVSLGEASRC LDVSRSTLKR VCRDLGILTW PLPHRKKKYS PFGIYTAVLL LVRLKRWSCS  60
SNHHGFSPRW WTCDKHKDFD SKIKDXQKEA NDSAKVTSPL AIFPIAEPAC PKPFSKPPQE  120
QFGIYEAAFF IAGFKTLEKE DCDNATLPYN DSLAIGRVSN SIDMFHAFSK QDVGLFLQTN  180
KVTVKATFDN DTVKFQFPIS SGLLQLKNQV AQRIRLESSK FVLKYRDEDD DLILIACDAD  240
LRNLMPFSAT SGSNITLKLL VEMVHDRESS NGKPR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.50990.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021969892.12e-74protein NLP7-like
TrEMBLA0A2U1L6X71e-177A0A2U1L6X7_ARTAN; PB1 domain, RWP-RK domain, Homeodomain-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.16e-11Nin-like family protein