PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015489
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 427aa    MW: 48370.3 Da    PI: 9.0106
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-4167PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-435160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK543.2e-17142189348
     RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP..hRk 48 
                ++ +le+l++yF +pi +A+++L+v+ ++LKr CR +GI  WP  hRk
  Aan015489 142 QSFTLETLQQYFRMPIGEASRCLDVSRSTLKRVCRDLGILTWPlpHRK 189
                5789**************************************644787 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151913.105127213IPR003035RWP-RK domain
PfamPF020424.0E-14144189IPR003035RWP-RK domain
SuperFamilySSF542773.92E-15330412No hitNo description
PROSITE profilePS5174515.542333416IPR000270PB1 domain
SMARTSM006661.1E-15333416IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.8E-15333411No hitNo description
PfamPF005646.5E-15334414IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
XTHSYVLEIF LPVDMKEIAD LQNLVRNLKL HFTLSSGFEL GDLLNTAFIK VSTEVSKPSS  60
AVQPDIIDTS LTAEPVELGL LTEAGTNRQI DCLNAQDERD SGNDYYNLVA SPILENTISV  120
EEGCGSVEKQ ISVKQRRKRK LQSFTLETLQ QYFRMPIGEA SRCLDVSRST LKRVCRDLGI  180
LTWPLPHRKK KYSPFGIYTA VLLLVRLKRW SCSSNHHGFS PRWWTCDKHK DFDSKSKMSK  240
EANDSARVTS PLAIFPIAEP ACPKPFSKPP QEQFGIYEAA FLLLGLKRWR KRTAIMHTLP  300
YNDSLAIGRV SNSIDMFHAF SKQDVGLFLQ TNKVTVKATF DHDTVKFQFP ISSGLLQLKT  360
QVAQRIRLES SKFVLKYRDE DDDLILIACD ADLRNLMPFS ATSGSNITLK LFVEMVHDKE  420
SNNGKPR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.50990.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021969892.16e-93protein NLP7-like
TrEMBLA0A2U1L6X70.0A0A2U1L6X7_ARTAN; PB1 domain, RWP-RK domain, Homeodomain-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.12e-14Nin-like family protein