PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015477
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 270aa    MW: 30073.1 Da    PI: 8.3169
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-589160991PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.82.2e-33117175159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+v+g+++prsYY+CtsagC+v+k+ver+++dpk+v++ Yeg+Hnh+
  Aan015477 117 LDDGYRWRKYGQKVVRGNPNPRSYYKCTSAGCTVRKHVERASHDPKAVITAYEGKHNHD 175
                59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-37102177IPR003657WRKY domain
SuperFamilySSF1182905.62E-29109177IPR003657WRKY domain
PROSITE profilePS5081138.4112177IPR003657WRKY domain
SMARTSM007741.8E-37117176IPR003657WRKY domain
PfamPF031061.9E-25118175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
RVRKGTHDHP KPQPSRRFSA GALMSSQEEN PDKLQYAAYQ AGISASNGQS SNLDANGTPL  60
QSPRQANQDS TDDVDDDDDP YSKKRRTEFG TLDITPVVKP IREPRVVVQT TSEVDILDDG  120
YRWRKYGQKV VRGNPNPRSY YKCTSAGCTV RKHVERASHD PKAVITAYEG KHNHDVPLVK  180
NNSHDLTGSG NQRTRLEENN AICLDLVVGN RIPDQPQVQV SNSNFRKVVH WNDVYGSREN  240
GVEACNIDPS TLNHSSNPYS QNLGRIVMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-39108177877Probable WRKY transcription factor 4
2lex_A6e-39108177877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022028611.11e-165probable WRKY transcription factor 20
SwissprotQ93WV03e-78WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A2U1NY820.0A0A2U1NY82_ARTAN; WRKY family transcription factor family protein
STRINGXP_002529048.11e-101(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-75WRKY family protein