PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015119
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 270aa    MW: 30127.8 Da    PI: 6.1563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-32307PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20117167255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp   + k +r++lg+f ta eAaka+++a+ kl+g
  Aan015119 117 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFETAIEAAKAYDRAAFKLRG 167
                8********.**********9...4345*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.7E-33116176IPR001471AP2/ERF domain
CDDcd000185.52E-33116175No hitNo description
SuperFamilySSF541716.02E-23117177IPR016177DNA-binding domain
SMARTSM003805.7E-37117181IPR001471AP2/ERF domain
PROSITE profilePS5103224.184117175IPR001471AP2/ERF domain
PfamPF008472.2E-14117167IPR001471AP2/ERF domain
PRINTSPR003671.1E-13118129IPR001471AP2/ERF domain
PRINTSPR003671.1E-13157177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MSFTNESSTL DLIRQHLLID DQSFLQTYSF SFENNSIKTE FANNSCLEHE LETSNSNTNN  60
TLSNECVASN CTSTTSNNSS FKERKRSLNI LNISIPFPPP TVVKETVKLE EFEERKHYRG  120
VRQRPWGKFA AEIRDPNKKG TRVWLGTFET AIEAAKAYDR AAFKLRGSKA ILNFPLEIGY  180
AVAPPQGVTI TSRKRAAEEI EVEHVRKEPK VEPVTAEFDG VKIDNGVVPL TPSSWTAVWD  240
FGDGNGKGIF EVPPLSPYPN ISFSSGCIVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-33116178163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.23260.0leaf| trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, mostly in root tip and lateral root tips. {ECO:0000269|PubMed:10945353}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023753238.12e-99ethylene-responsive transcription factor 5-like
SwissprotQ9LW481e-65ERF5_NICSY; Ethylene-responsive transcription factor 5
TrEMBLM4IVT21e-172M4IVT2_ARTAN; Ethylene-responsive transcription factor 5
STRINGXP_009609460.13e-66(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.19e-51ERF family protein